Sphingopyxis fribergensis: SKP52_01030
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Entry
SKP52_01030 CDS
T03542
Symbol
fadB
Name
(GenBank) bifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00071
Fatty acid degradation
sphk00362
Benzoate degradation
sphk00650
Butanoate metabolism
sphk01100
Metabolic pathways
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
sphk01212
Fatty acid metabolism
Module
sphk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SKP52_01030 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SKP52_01030 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SKP52_01030 (fadB)
Enzymes [BR:
sphk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SKP52_01030 (fadB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Pyr_redox_2
ApbA
Pyr_redox
F420_oxidored
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
TrkA_N
NAD_binding_7
GIDA
Motif
Other DBs
NCBI-ProteinID:
AJA07148
UniProt:
A0A0A7PD95
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All DBs
Position
237919..239994
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AA seq
691 aa
AA seq
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MPIHQEIVGRILLLRVDNPPVNALSRVERRGLIDGIVRGADEDIDAVVIIGTGASFIAGA
DIREFGQPPEPPHLPEVVEAIEASTKPVVAAIAGQALGGGLEVALACHYRLASADARLGL
PETTLGLIPGAGGTQRLPRLVDPLVAADMVATGKPRNATSALQIGLIDWIAERPLEIEAV
ERARDVARQSLDGRRLSEGNVATSTATIEALAHLKADTVRKSRGALAPGIAIDLIRLALQ
SPYDAGVAEERARFLELRSSPQAAALRHIFFAEREAAKGQGGAARSVARVGVIGAGTMGA
GIAMSVADAGFPVTLIEQNEAALAAGLDRIARAYGDGVARKRLTSEVAAERRANITGATD
YEALAQADLIIEAAFETMEVKDSIFRRLDAVARPEAILATNTSYLDIDAIAAVTDRPGQV
VGLHYFSPANVMKLLEIVRGRKTDPAVLATALAFARRTGKIPVVAGVCHGFIGNRMLRAY
NREAGLLLLEGATPSRVDKALTDFGMAMGPFAVADLSGIDIGHKGRMVMEPGSYEPAAFR
VHDTLVSRGFHGRKTGAGFYLYCDGKVEGDNPEVADIVAAARENFGVEARNIDTHEIVER
CIFAAAAEGLQIVKEGIAARPGDVDVVFVNGYGFPRHRGGPIFHLNQAGDVGVAALRGYA
QGPFGRWWPSADPHDSNVEMHPRGQSTQDAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccatcaggaaatcgtcggcaggatccttctgctcagagtcgacaatcccccg
gtcaatgccttgtccagggtcgagcgccgcggcctgatcgatgggattgtgcgcggggcc
gatgaggatatcgatgcagtcgtcatcatcggtaccggcgcgagcttcatcgcaggcgcg
gacatccgggagttcggccagccgcccgagccgccacatcttcccgaagtcgtcgaggcg
atcgaggcttctacaaagccggtcgttgcggcgatcgccggtcaggcgctcggaggcggg
ctggaagtcgccctagcatgccactatcggctggcaagcgcagacgccaggctcggactt
cctgaaacgaccctgggtctcattcctggcgcgggcgggacgcaacgcttgccccgtctt
gtcgatccccttgtcgccgcagacatggttgccaccggtaagccgcgcaatgcgacaagc
gcgctgcagatcgggctgatcgactggatcgccgaaaggccgctcgagatcgaagctgtg
gagcgggctcgagatgtcgccaggcagtcgctcgacgggcgacgtctgtctgaagggaat
gtcgcgacatcgaccgccacaattgaagcgctcgcccacctgaaggcggacacggtcaga
aaatcgcggggcgcactcgctcccggcatcgccatagacctcatccgtttggcgctacaa
agtccctatgatgccggtgtggccgaggaacgggcccgttttcttgaattacgatcgagc
ccgcaagccgccgccctgcggcacatcttctttgcggaacgggaagccgcgaaaggacag
ggcggggccgcgcgcagtgttgcacgcgtcggcgtcataggcgcgggcacgatgggcgcg
gggatcgcgatgagcgtggcggacgcaggctttccggtcaccctcatcgaacaaaatgaa
gcggcgcttgccgccgggctcgatcgtatcgcgcgagcctatggcgatggggtcgcgcga
aaaagactgaccagcgaggtagcggccgagcgccgtgccaatatcaccggcgcaaccgat
tatgaggcgttggcgcaagcggatctcattatcgaggccgccttcgaaaccatggaggtc
aaggattcgatcttcaggcgtcttgacgccgtcgcgcggcccgaggcgatcctggcgacg
aacacctcctatctcgacatcgacgcaatcgcggccgtaaccgaccgacccggccaggtg
gtggggctccattatttcagcccggccaatgtcatgaagctcctggagatcgtgcgcggg
cgcaaaaccgatccggcggtgctggcgaccgcgctcgctttcgcccgccgaaccggcaag
ataccggtcgtcgctggcgtttgccacggtttcatcggcaaccggatgctgcgtgcctac
aaccgggaggcggggctattgttgctcgaaggcgcgacaccctcgcgggtcgacaaggct
ttgacggacttcggcatggccatgggaccctttgccgtggcggacctctccgggatcgac
atcggtcacaagggacggatggtcatggaaccgggatcctatgagcctgctgctttccgc
gtccacgacacgctggtttcgcgtggatttcacggtcgcaagactggcgctggtttttat
ctctattgtgacgggaaggtcgagggcgacaaccccgaagtggcagacatcgtggcggcg
gcgcgcgagaattttggcgtcgaagctcgaaacatcgatacccacgaaatcgtggagcgg
tgcatctttgcggctgccgccgaaggactgcagatcgtgaaagaagggatcgcggcgcgg
ccaggcgacgtcgatgtggttttcgtgaacggctatggcttccctcgccaccgcggagga
ccgatcttccatctgaaccaggccggcgatgtcggtgtcgcggcgcttcgtggctatgcg
caaggccccttcggccgctggtggccatctgccgatccgcatgacagcaacgtcgagatg
caccctcgaggccaatcaacacaagatgccgcttaa
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