Sphingopyxis fribergensis: SKP52_02025
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Entry
SKP52_02025 CDS
T03542
Name
(GenBank) ABC transporter
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sphk03012
]
SKP52_02025
Translation factors [BR:
sphk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SKP52_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
MMR_HSR1
TsaE
RNA_helicase
DUF87
AAA
RsgA_GTPase
nSTAND3
NACHT
ABC_tran_CTD
SbcC_Walker_B
RuvB_N
AAA_16
MeaB
AAA_13
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AJA07342
UniProt:
A0A0A7PHC7
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All DBs
Position
456158..458032
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AA seq
624 aa
AA seq
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MLTINGITVRLGGRAILERATASLPAKSRVGLIGRNGAGKSTLMKVMIGQLEADEGSIDM
PRKTRVGYIAQEAPNGTATPFDTVLAADTERAELLAASETEQDPDKLGDIHERLIAIDAY
TAPARAARILIGLGFDEEMQAQPLDSFSGGWKMRVALAALLFSEPDLLLLDEPSNHLDLE
ATLWLENFLRAYPGQLVVISHERDLLNNVVDNILHLEGGKVMLYAGGYDAFERQRAERAA
QLAAAKASQDAQRAKLQDYVARNSARASTAKQAQSRAKMLARMQPIAALAEDQTLAFDFP
SPDELKPPLITLDLASVGYADKPVLQRLNLRIDPDDRIALLGRNGNGKTTLARLLAAQLA
PMAGAMAASGKMRVGYFTQYQVEELDGSDTPLAHMTRVMEGKTQGAVRAQLGRFGFSGNK
AVTQVAKLSGGERARLALALITRDAPHLLILDEPTNHLDVDAREALVQALNGFEGAVVLV
SHDRHMLELTADRLVLVDDGTAREYDGSMDDYVDMILGKGPQKDRVSKADKKEDRKAAAA
AREAAAKIKKDVSDAEADLAKYEVVLSAIDRAMFDPQGAASEYKGLTMSELSQRRGKIVA
AQEAAEARWVAASEALEAFEKAAA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatcaacggaatcactgtacgccttggcgggcgcgccatcctcgaacgcgcc
accgcgagcctgccggcgaaaagccgcgtcgggctgatcgggcgcaacggcgcgggcaaa
tcgacactgatgaaggtgatgatcggccagctcgaagccgacgagggcagcatcgacatg
ccgcgcaagacgcgcgtcggctatatcgcgcaggaagcgccgaacggcaccgcgacgcct
ttcgataccgtgctcgccgccgataccgagcgggccgaattgctcgccgcatcggagacc
gaacaggaccccgacaagcttggcgacattcacgagcggctgatcgcgatcgacgcctat
accgctcccgcgcgcgccgcgcgcatcctgatcgggctgggtttcgacgaggaaatgcag
gctcagccgctcgacagcttctcgggcgggtggaagatgcgggtcgcgctcgcggcgctg
ctgttctctgagcccgacctgctgctgctcgacgaaccatcgaaccaccttgacctcgaa
gcgaccttgtggctcgaaaatttcctgcgcgcctatccggggcagctcgtcgtcatcagc
cacgagcgcgacctgctcaacaatgtcgtcgacaatatcctgcatcttgagggcggcaag
gtgatgctctatgcgggcggctatgacgcgttcgaacgccagcgcgccgaacgcgcggcg
cagctcgccgcggccaaggcgtcgcaagatgcacagcgcgccaaactccaggactatgtc
gcgcgcaacagcgcgcgcgcctcgaccgcgaaacaggcgcagtcgcgcgccaagatgctc
gcgcggatgcagccgatcgccgccctcgccgaggaccagacgctcgcattcgattttccg
agccccgacgaactcaagccgccgctgatcacgcttgatttggcgagcgtaggttacgcc
gataagcctgtgctccagcggctcaacctccgcatcgatcccgacgaccggatcgcgctg
ctcggccggaacggcaatggcaagacgacgctcgcacgcctgctcgcggcgcagctcgcg
ccgatggcgggtgcgatggcagcatcgggcaagatgcgcgtcggctatttcacccaatat
caggtcgaggaactcgacggcagcgacaccccgctcgcgcatatgacgcgcgtgatggag
ggcaagacgcagggcgccgtccgtgcgcaactcggtcgcttcggcttttcgggcaacaag
gcggtgacgcaggtcgcgaaactgtcgggcggcgaacgcgcgcggctcgcgctcgcgctt
atcacgcgcgacgcgccgcatctcctcatcctcgacgaaccgacgaaccatttggacgtc
gatgcgcgcgaggctctggtgcaggcgctcaacggcttcgagggcgcggtggttctcgtc
agccacgaccgccacatgctcgaactcactgccgaccggctcgtgctcgtcgatgacggc
accgcgcgcgaatatgacggcagcatggacgactatgtcgacatgatcctgggcaaaggg
ccgcagaaggaccgcgtgtcgaaagccgacaagaaggaagatcgcaaggccgccgccgcg
gcgcgcgaggccgccgcgaagatcaagaaggacgtctcggacgccgaggcagatctcgcc
aaatatgaggtcgtcctgtccgccatcgaccgcgcgatgttcgacccgcagggcgccgcg
agcgaatacaaaggcctgacgatgagcgagctgtcgcagcgccgcggcaagatcgtcgcc
gcgcaggaagccgccgaagcacgctgggtggcagcgagcgaagcgctggaggcgtttgag
aaagcggcggcctag
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