KEGG   Sphingopyxis fribergensis: SKP52_02025
Entry
SKP52_02025       CDS       T03542                                 
Name
(GenBank) ABC transporter
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
sphk  Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:sphk03012]
    SKP52_02025
Translation factors [BR:sphk03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    SKP52_02025
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn AAA_21 SMC_N AAA_22 AAA_29 MMR_HSR1 TsaE RNA_helicase DUF87 AAA RsgA_GTPase nSTAND3 NACHT ABC_tran_CTD SbcC_Walker_B RuvB_N AAA_16 MeaB AAA_13 AAA_28
Other DBs
NCBI-ProteinID: AJA07342
UniProt: A0A0A7PHC7
LinkDB
Position
456158..458032
AA seq 624 aa
MLTINGITVRLGGRAILERATASLPAKSRVGLIGRNGAGKSTLMKVMIGQLEADEGSIDM
PRKTRVGYIAQEAPNGTATPFDTVLAADTERAELLAASETEQDPDKLGDIHERLIAIDAY
TAPARAARILIGLGFDEEMQAQPLDSFSGGWKMRVALAALLFSEPDLLLLDEPSNHLDLE
ATLWLENFLRAYPGQLVVISHERDLLNNVVDNILHLEGGKVMLYAGGYDAFERQRAERAA
QLAAAKASQDAQRAKLQDYVARNSARASTAKQAQSRAKMLARMQPIAALAEDQTLAFDFP
SPDELKPPLITLDLASVGYADKPVLQRLNLRIDPDDRIALLGRNGNGKTTLARLLAAQLA
PMAGAMAASGKMRVGYFTQYQVEELDGSDTPLAHMTRVMEGKTQGAVRAQLGRFGFSGNK
AVTQVAKLSGGERARLALALITRDAPHLLILDEPTNHLDVDAREALVQALNGFEGAVVLV
SHDRHMLELTADRLVLVDDGTAREYDGSMDDYVDMILGKGPQKDRVSKADKKEDRKAAAA
AREAAAKIKKDVSDAEADLAKYEVVLSAIDRAMFDPQGAASEYKGLTMSELSQRRGKIVA
AQEAAEARWVAASEALEAFEKAAA
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgctgacgatcaacggaatcactgtacgccttggcgggcgcgccatcctcgaacgcgcc
accgcgagcctgccggcgaaaagccgcgtcgggctgatcgggcgcaacggcgcgggcaaa
tcgacactgatgaaggtgatgatcggccagctcgaagccgacgagggcagcatcgacatg
ccgcgcaagacgcgcgtcggctatatcgcgcaggaagcgccgaacggcaccgcgacgcct
ttcgataccgtgctcgccgccgataccgagcgggccgaattgctcgccgcatcggagacc
gaacaggaccccgacaagcttggcgacattcacgagcggctgatcgcgatcgacgcctat
accgctcccgcgcgcgccgcgcgcatcctgatcgggctgggtttcgacgaggaaatgcag
gctcagccgctcgacagcttctcgggcgggtggaagatgcgggtcgcgctcgcggcgctg
ctgttctctgagcccgacctgctgctgctcgacgaaccatcgaaccaccttgacctcgaa
gcgaccttgtggctcgaaaatttcctgcgcgcctatccggggcagctcgtcgtcatcagc
cacgagcgcgacctgctcaacaatgtcgtcgacaatatcctgcatcttgagggcggcaag
gtgatgctctatgcgggcggctatgacgcgttcgaacgccagcgcgccgaacgcgcggcg
cagctcgccgcggccaaggcgtcgcaagatgcacagcgcgccaaactccaggactatgtc
gcgcgcaacagcgcgcgcgcctcgaccgcgaaacaggcgcagtcgcgcgccaagatgctc
gcgcggatgcagccgatcgccgccctcgccgaggaccagacgctcgcattcgattttccg
agccccgacgaactcaagccgccgctgatcacgcttgatttggcgagcgtaggttacgcc
gataagcctgtgctccagcggctcaacctccgcatcgatcccgacgaccggatcgcgctg
ctcggccggaacggcaatggcaagacgacgctcgcacgcctgctcgcggcgcagctcgcg
ccgatggcgggtgcgatggcagcatcgggcaagatgcgcgtcggctatttcacccaatat
caggtcgaggaactcgacggcagcgacaccccgctcgcgcatatgacgcgcgtgatggag
ggcaagacgcagggcgccgtccgtgcgcaactcggtcgcttcggcttttcgggcaacaag
gcggtgacgcaggtcgcgaaactgtcgggcggcgaacgcgcgcggctcgcgctcgcgctt
atcacgcgcgacgcgccgcatctcctcatcctcgacgaaccgacgaaccatttggacgtc
gatgcgcgcgaggctctggtgcaggcgctcaacggcttcgagggcgcggtggttctcgtc
agccacgaccgccacatgctcgaactcactgccgaccggctcgtgctcgtcgatgacggc
accgcgcgcgaatatgacggcagcatggacgactatgtcgacatgatcctgggcaaaggg
ccgcagaaggaccgcgtgtcgaaagccgacaagaaggaagatcgcaaggccgccgccgcg
gcgcgcgaggccgccgcgaagatcaagaaggacgtctcggacgccgaggcagatctcgcc
aaatatgaggtcgtcctgtccgccatcgaccgcgcgatgttcgacccgcagggcgccgcg
agcgaatacaaaggcctgacgatgagcgagctgtcgcagcgccgcggcaagatcgtcgcc
gcgcaggaagccgccgaagcacgctgggtggcagcgagcgaagcgctggaggcgtttgag
aaagcggcggcctag

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