Sphingopyxis fribergensis: SKP52_02115
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Entry
SKP52_02115 CDS
T03542
Name
(GenBank) Long-chain specific acyl-CoA dehydrogenase
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00071
Fatty acid degradation
sphk00280
Valine, leucine and isoleucine degradation
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01212
Fatty acid metabolism
Module
sphk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
SKP52_02115
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SKP52_02115
Enzymes [BR:
sphk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
SKP52_02115
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
AJA07360
UniProt:
A0A0A7PBJ5
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Position
480096..481250
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AA seq
384 aa
AA seq
DB search
MSLDNLSRSAYSEDHEAFRATVRQFLEKEIAPNAAKWAEDGIVPKDIWPKAGELGMLCPT
VPEEYGGLGLDFGYNAIVDEESAYYGRATTGFSLQSDIVTSYIVKYGSEEQKKYWLPKMV
AGEVITAIAMTEPGTGSDLQGMRTTAKKDGNHYVINGSKTYITNGQNADLILVCVKTDTE
VQPAWKGVSIVLVEADREGYERGRNLDKIGQDEADTSEMFFNDVRVPITNCLGEEGKGFI
YLMSELPQERLSIAVSAQASAQRAFDDTVEFTRDRKAFGKPILDFQNTRFVLADLKTKLQ
VGWAHLDWALARHLKKELTPEEGAAAKLWHTELQWEVMDKCLQLHGGAGYMNEYPIARAW
RAARVTRIFGGTNEIMKELIGRKL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgataatctgtcgcgctccgcctactccgaagaccatgaggcgtttcgcgcc
acggtgcgccagttcctcgaaaaggaaatcgcgccgaacgcggcaaaatgggccgaggac
ggcatcgtgccgaaggatatctggccgaaggcgggcgagcttggcatgctgtgcccgacg
gtgcccgaggaatatggcgggctcgggctcgatttcggctacaacgcgatcgtcgatgaa
gagagcgcctattatggccgcgcgacgacgggcttctcgctccagtcggatatcgtcacc
tcctatatcgtcaaatatggcagcgaagagcagaagaagtactggctgcccaagatggtc
gcgggcgaagtgatcaccgcgatcgcgatgaccgaacccggcaccggcagcgaccttcag
gggatgcgcacgaccgcgaaaaaggatggcaatcattatgtcatcaacggctcgaaaacc
tatatcaccaacggccagaacgccgacctgatcctcgtctgcgtcaagaccgacaccgag
gttcagccggcgtggaagggcgtgtcgatcgttctcgtcgaggccgaccgcgaaggctat
gagcgcgggcgcaacctcgacaagatcgggcaggacgaggccgatacgtcggaaatgttc
ttcaacgacgtccgggtgccgatcaccaactgccttggcgaagagggcaagggctttatc
tatctgatgagcgagctgccgcaggaacgcctctcgattgcggtgtcggcgcaagcgtcg
gcgcagcgcgcgttcgacgacacggtcgagttcacccgcgatcgcaaggctttcggcaag
ccgatcctcgatttccagaatacgcgtttcgtgctcgctgatttgaagaccaagctgcag
gtcggctgggcgcatctcgactgggcgctggcgcggcatttgaagaaagaactgaccccc
gaggagggcgctgcggcgaagctgtggcacaccgaactgcaatgggaagtgatggacaaa
tgcctccagctgcacggcggcgcaggctatatgaacgaatatccgatcgcccgcgcctgg
cgcgccgcgcgcgtgacccgcatctttggcggcacgaacgagatcatgaaggaactgatc
gggcggaagctctga
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