Sphingopyxis fribergensis: SKP52_03010
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Entry
SKP52_03010 CDS
T03542
Name
(GenBank) OmpA/MotB protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_03010
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_03010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
DEC-1_N
Mito_fiss_reg
Motif
Other DBs
NCBI-ProteinID:
AJA07531
UniProt:
A0A0A7PBR0
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All DBs
Position
610881..611999
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AA seq
372 aa
AA seq
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MRKLAVALALASTTLASPVLARDNSWYVGVGAGAMLVEDLDLDIGTFNNAGTLDHRAGYD
AEGTVGYDFGGFRAEVEVGYREADIKSGRFTTPGIPQSAAGTGAPFTGSADLAGDTNALS
FMVNGMLDFGDDDGLQGFVGGGAGIARVSVEPVFAGNFLDDSDTGFAWQAIAGVRAPLSD
NIDVGLKYRFFNADNIDLVDQVGRDVSTRFRSHSILGTLTFNFGGAPAPEPVAPPPPPPP
PPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQVMLAG
HADRSGSAKYNVGLSERRNTAVRSYLTARGISDGSISAQGFGESRPAVATADGVRNDQNR
RVEITYGPNSGM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcttgccgtcgctctggcgttggcctccaccacccttgcgtcgcctgttctg
gcgcgtgacaactcttggtatgttggtgtgggtgcaggcgcaatgctcgtcgaggacttg
gatctcgacatcggcacgttcaataatgccggtacgcttgatcatcgcgctggctacgac
gctgaaggtaccgtcgggtatgacttcggcggtttccgtgcggaagtcgaagtcggttat
cgtgaagccgacatcaagtcgggccgtttcacgactccgggtatcccgcagtcggctgcc
ggcactggcgcgcccttcacgggctctgctgatctggccggcgatacgaatgcgctgagc
ttcatggtcaacggcatgctcgatttcggtgacgacgacggccttcagggctttgtcggc
ggtggtgccggtatcgctcgcgtttcggtcgaacccgtcttcgccggtaacttcctggac
gattcggacacgggctttgcctggcaggctattgcgggcgttcgcgctccgctgagcgac
aacatcgatgttggcctgaagtatcgcttcttcaacgccgacaatatcgacctggtcgac
caagtcggtcgcgacgtttcgacgcgcttccgttcgcactcgatcctgggtacgctgacg
ttcaacttcggtggtgctccggcgccggaaccggtggctccgccgccgcccccgcccccg
ccgccgcctcccccgccgcctccgccgccgccgccggtcgtggaatgcgcacccggaccg
tatatcgtgtacttcgactgggatcagtcgaacatcacgccggaagcggcttcgacgctc
gacaacgcgatcagcgcctataaccgtggttgcacgggtacgcaggtcatgctcgccggt
cacgctgaccgttcgggttcggccaagtacaacgtcggcctgtcggaacgtcgtaacact
gcggttcgcagctatcttaccgctcgcggtatctcggatggctcgatcagcgcgcagggc
tttggcgaaagccgcccggccgttgcaaccgccgatggcgtccgcaacgaccagaaccgt
cgcgtggaaatcacttacggcccgaactcgggcatgtaa
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