Sphingopyxis fribergensis: SKP52_04175
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Entry
SKP52_04175 CDS
T03542
Name
(GenBank) alginate lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SKP52_04175
Enzymes [BR:
sphk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
SKP52_04175
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Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
AJA07763
UniProt:
A0A0A7PEY1
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Position
865810..867972
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AA seq
720 aa
AA seq
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MTRTLALLLAAATLPAIPAAAQTPPAASAQAYAPFFASEVERARRDVDAAIRAGINVPVP
KDPGGGFTHEQHKRNYRVIFEGGQLFRLTGEARYRDHVRDLLLAYADLYPGLGPHPAASN
QVPGRLFWQSLNDSVFLVNAVQGYAEIRGALSAADRKRIDDQVIRPMARFLSDESPEVIN
RIHNHATWAAAGVGLSGYLLGDRDLVDKALLGLDKSGKAGFLRQLDLLFSPDGYYAEGPY
YQRYALQPFVVFAAAIAANDPQRKIFEYRGGIVLKAIRTAIDLTHDGYFLPINDAMPDKS
LRTEELYHAVAIAYGATKDPAFLSIADWQGRTVLTPAGQAMAADLAAGKAKPWPYGSRLL
SDGPDGKGGALVLLRTKADPTGPLLVAKNTVQGMGHGHFDRLGWLYYDETGAVVTDYGAA
RFLNVEAKQGGRYLPENDSWASATIAHNTLVVDEQSHFAGDWKAGEKFGTRQLAAALEGP
TRYAIGEIHSAYKDVKIRRALLLLEVDGLSNPLTLDILHGTGSGRHVYDLPLHFSGHIID
SDIALDRNLAERPVLGKANGYQHLWVDGVGTKAGKARLTWMQGSRFYSYHMLPPAGANFI
VAESGANDPEFNLRREPALIQRVAGAADATFVSLLEPHGAYDASAETVVASSSRVTGLDH
RREKGADLVIVTLVDGRRIAVAVADDVAPAARHSVTIDGRTLAWTGPVGRLDLAKTGAKK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgtacgctcgcgctcctgctcgccgcggccacgctcccggccatccccgccgcc
gcgcagaccccgcccgccgcttcggcgcaggcctatgcgccgttcttcgcgtccgaggtc
gagcgtgcgcggcgtgacgtcgacgcggctatccgggcgggcatcaacgtgcccgtcccc
aaggatccgggcggcggcttcacgcacgaacagcacaagcgcaattaccgcgtcatcttc
gagggcggccagctctttcgcctgaccggcgaggcgcgataccgcgaccatgttcgcgac
cttttgctcgcctatgccgatctctatccggggctggggccgcaccccgcggcgtcgaac
caggtgccgggacgcctgttctggcagagcctgaacgacagcgtctttctggtgaacgcg
gtgcagggctatgccgagattcgcggcgcgctttccgccgccgaccgcaagcggatcgac
gatcaagtgatccgcccgatggcgcgcttcctgtccgacgagtcgcctgaggtcatcaac
cgtatccacaatcacgcgacctgggctgcggcgggtgttggtctgtcgggttatctgctc
ggcgaccgcgaccttgtcgacaaggcgctgctcgggctcgacaagagcggcaaggcgggc
ttcctgcgccagctcgacctgctcttctcgcccgacggctattatgccgaagggccctat
tatcagcgctatgcgctccagcctttcgtcgtcttcgcggcggcaatcgcggcgaacgat
ccccagcggaagattttcgagtatcggggcggcatcgtgctgaaagcgatccgtaccgcg
atcgacctgacccacgacggatatttcctgccgatcaacgatgcgatgcccgacaagagc
ctgcgcaccgaggaactctatcacgccgtcgcgatcgcctatggcgccacgaaagatccg
gctttcctgtcgatcgccgactggcaggggcgcaccgtgctgaccccggcggggcaggcg
atggcggccgacctcgccgcgggcaaggcgaagccatggccctatggctcgcggctgctc
tccgacggtcccgacggcaagggcggcgcgctcgtcctgctgcggaccaaagccgacccg
acgggaccgctgctcgtggccaagaacacggtgcagggcatggggcacggccatttcgac
cggctcggctggctttattatgacgagaccggcgcggttgtcaccgattatggcgcggcg
cgcttcctgaatgtcgaggcgaagcagggcggacgttatctgcccgaaaacgacagctgg
gcgagcgcgacgatcgcgcacaatacgctagtcgtcgatgagcaaagccacttcgcaggc
gattggaaagctggcgaaaaatttggcacccgccagctcgccgccgcgctcgaagggccc
actcgctacgcgatcggcgaaatccacagcgcgtataaggatgtcaaaatccgccgcgcc
ttgctgctcctcgaagtcgatggtctctcaaatcccctcacgctcgatatcctccacggg
actggcagcggcaggcatgtctatgacctgccgctgcatttttcgggacatatcatcgac
agcgacatcgctctcgaccgcaatctcgccgagcgcccggtgctcggcaaggcgaacggt
taccagcatctgtgggtcgacggcgtggggaccaaggccggcaaggcgcggctgacatgg
atgcagggcagccgtttctactcataccatatgctgccgcccgcgggcgccaacttcatc
gtcgcagagagcggggcgaacgatcccgagttcaacctgcgccgcgaacccgcgctgatc
cagcgcgtcgcgggcgccgccgatgcaacattcgtcagcctgctcgaaccgcatggcgcc
tatgacgcgtcggcggagaccgtcgtcgccagcagttcgcgcgtgacggggctcgaccat
cgccgcgaaaagggcgccgatctggtcatcgtcacgctggtcgacgggcgccgcatcgcg
gtcgcggtcgccgacgatgtcgcgcccgccgcgcggcacagcgttaccatcgatggccgc
acactcgcctggactggccccgtcggccgcctcgacctcgccaagaccggagcgaagaaa
tga
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