Sphingopyxis fribergensis: SKP52_04420
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Entry
SKP52_04420 CDS
T03542
Symbol
cysS
Name
(GenBank) Cysteine-tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SKP52_04420 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphk01007
]
SKP52_04420 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphk03016
]
SKP52_04420 (cysS)
Enzymes [BR:
sphk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SKP52_04420 (cysS)
Amino acid related enzymes [BR:
sphk01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SKP52_04420 (cysS)
Transfer RNA biogenesis [BR:
sphk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SKP52_04420 (cysS)
Prokaryotic type
SKP52_04420 (cysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
DALR_2
Ferritin-like
Motif
Other DBs
NCBI-ProteinID:
AJA07811
UniProt:
A0A0A7PCG8
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All DBs
Position
complement(916884..918425)
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AA seq
513 aa
AA seq
DB search
MIDASASPLMLFNSLTRSLETFEPVHPGVPGDPANPPEARVYSCGPTVYNFQHIGNMRAY
VFADTLGRTLKFKDYKLRHIINITDVGHLTSDADVGDDKMEKAAAQQGKTAWDVAAFYTA
EFKRDLNWLNVRDPAKWTVATDYVARMIEFAKRIADTHCYELDSGLYFDVSTVADYGRLA
RAVTDDGEGRIDEVEGKRHAADFAIWRKTPVGETRQMEWDSPWGRGAPGWHLECSVMGEA
ELGMPFDIHTGGIDHREIHHPNEIAQNQAYRGCGGLDCAEHSGARMWMHNNFLIDRGGKM
SKSTGEFLRLQLLVDRGYHPLAYRLMCLQAHYRSELEFSWEGLGAAFTRLKRMYKTVEKR
KSEQFELTGTPVDDPALFEPIPRDKWHETEILGYLQDFDVAMSDDLNTPKALLTLDTVLQ
DPSIDNGLRWHIVATLDQVLGLDILRRSQKSLRVRPKAATITVEEIDMLIRRRKDARDAK
DFAASDKLRDTLTAAGVEVMDGDPLGWDWRLEG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcctctgcctccccgctcatgctgttcaacagcctgacgcgcagcctcgaa
acattcgagcccgtccatcccggcgttcccggtgatccggcgaacccgccggaggcgcgc
gtctattcgtgcggaccgacggtgtataatttccaacacatcggcaatatgcgcgcctat
gtctttgccgacacactgggtcgcacgctaaagttcaaggactataagctgcgccacatc
atcaacatcaccgacgtcgggcacctgacctcggatgccgatgtcggcgacgacaagatg
gagaaggcggcggcgcagcaaggcaagactgcatgggacgtagccgccttttacaccgcc
gaattcaagcgcgacctcaattggctgaacgtccgcgatcccgcaaaatggaccgtcgcg
actgactatgtcgcccggatgatcgagttcgcgaaacgcatcgccgacacgcattgctac
gaactcgatagcggactgtatttcgacgtatcgacggtggccgactatgggcggctggcc
cgcgccgtcaccgatgatggcgaaggccgaatcgacgaagtcgaaggcaagcgccacgcc
gccgacttcgccatctggcgcaagacaccggtcggcgagacgcgccagatggaatgggat
tccccctggggtcgcggcgcgcccggctggcacctcgaatgttcggtgatgggcgaggcc
gaactcggcatgccgttcgacatccacaccggcgggatcgaccatcgcgagatccatcac
ccaaacgagatcgcgcagaaccaggcgtatcgcggttgtggcgggctcgattgcgctgaa
cattcgggcgcccggatgtggatgcacaataatttcctgatcgatcgcggcggcaagatg
tcaaagtccaccggcgaatttttgcggctgcaactgctcgtcgatcgcggctaccatccc
ctcgcctatcgcctgatgtgcctgcaggcgcattatcgcagcgagctggagttttcgtgg
gaaggtcttggcgcggcatttactcgactgaagcggatgtacaaaaccgtcgaaaagaga
aagtcagaacaattcgagcttacgggcacgccggttgatgacccagcccttttcgagcct
attccccgtgacaaatggcacgaaacagagatactggggtatcttcaagactttgacgtc
gccatgtcggatgacctgaacaccccgaaagcacttttgacgctcgacactgtcctgcag
gatccgtctattgataacggtctacgttggcacatcgtcgcaacgctcgatcaagtcttg
ggactcgacatccttcgacgttcgcaaaaaagcctacgtgttcgtcctaaggcagcaact
atcaccgttgaagagatcgacatgctcatccgccgccgcaaggacgcgcgcgacgcaaag
gactttgccgcctcggacaaactccgcgacacccttaccgccgcaggcgtcgaggtgatg
gatggcgacccgctcggctgggactggcggctggagggataa
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