Sphingopyxis fribergensis: SKP52_05885
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Entry
SKP52_05885 CDS
T03542
Name
(GenBank) AraC family transcriptional regulator
KO
K12243
AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_05885
Transcription factors [BR:
sphk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SKP52_05885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
TetR_N
Stirrup
Motif
Other DBs
NCBI-ProteinID:
AJA08102
UniProt:
A0A0A7PJJ0
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Position
complement(1229989..1230744)
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AA seq
251 aa
AA seq
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MTNKLSIRISPEFTSFVGRGPCDPAVLPPDALIFGFGDIGEPAVSMLLPEDVVGPADDHL
VVFAISRAACDRLFALRPKADGRWYLPANLRGLGRAVVAVEGESEVDDMLRSARSQELLC
QLFAELAADRMVEVGGSTSLSELDITRVAAAHQLVNEKWQEKLTVGNVARRCGLSKAKLT
RGFRELYQCSVAEAVSERRLQRARQLLAQSDLPISSIGYNCGYMSNASFTRAFARRFGMA
PTKMRGREATA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagctatccattcgcatttctccggagttcacgagcttcgtcggtcgcggc
ccctgcgaccccgcggttttgccgcccgacgcgctcatcttcggctttggcgatattggc
gagcccgcggtctcgatgcttcttcccgaagatgtcgtgggcccggccgacgatcatctg
gttgtattcgcgatcagccgcgccgcgtgcgatcgcctgttcgccctccgccccaaggcg
gatggtcgctggtacctccccgccaatcttcgcggactcggccgcgccgtggtcgcggtc
gagggcgagagcgaagtcgacgacatgctccgcagcgcgcgcagccaggaattgctctgc
cagcttttcgccgaactcgccgccgaccgcatggtcgaagtgggcggcagcacgtcgctg
agcgaactcgacatcacgcgcgtcgcggcagcgcaccagctggtcaacgagaagtggcag
gaaaagctgacggtcggaaatgtcgcccgccgctgcggcctcagcaaagccaagctgacg
cggggctttcgcgaactctatcaatgcagcgtcgccgaggcggtgagcgaacggcggctg
caacgcgcgcgtcagttgctcgcgcaaagcgacctgccgatatcgagcatcggctataat
tgcggctatatgagcaacgccagctttacgcgggcttttgcgcgccgctttggcatggcg
ccgaccaagatgcgcggccgcgaagccacggcctga
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