Sphingopyxis fribergensis: SKP52_06020
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Entry
SKP52_06020 CDS
T03542
Symbol
leuC1
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00290
Valine, leucine and isoleucine biosynthesis
sphk00660
C5-Branched dibasic acid metabolism
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01210
2-Oxocarboxylic acid metabolism
sphk01230
Biosynthesis of amino acids
Module
sphk_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
SKP52_06020 (leuC1)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
SKP52_06020 (leuC1)
Enzymes [BR:
sphk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
SKP52_06020 (leuC1)
4.2.1.35 (R)-2-methylmalate dehydratase
SKP52_06020 (leuC1)
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AJA08129
UniProt:
A0A0A7PDV0
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Position
1268179..1269621
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AA seq
480 aa
AA seq
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MEGQDLRGITMGRLRTLYDKIWDAHAVAEDDGETLLYIDLHLLHEVTSPQAFAGMIAAGR
PVRRPERALALSDHNVPTVGQAQGPAGVADAEARAQLEALVSNTRRFGIENFPMGDPRGG
IVHVVGPEQGRSQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVEHTLATQTIRQRRSLNM
RVTVDGLLAPHVHAKDLALHLLGVVGVDGAAGHVIEYAGEAVRALSMEARMTLCNLSIEM
GARAGLVAPDTTTFAYLEGRPAVPTGPDWDTATARWQALGSDDEAVFDREFWVDARDVQP
MVSWGTNPSQVVAIDGYIPDPAALTDVDARMVAGRALAYMDLVPGTPVAGLRLDRVFIGS
CTNSRIEDLRVVVEVVRGRRVAPHVRAMVVPGSGLVKRQAEEEGIDRVLRDAGFDWREPG
CSMCVGMNADRLQPGERCAATSNRNFENRQGRGGRTHLMSPALAAASAIAGCIAAPEMPG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggagggccaggatttgcgcgggataaccatggggcgcctgcgcacgctttacgacaaa
atctgggacgcgcatgcggtcgcggaggatgatggcgagactttgctttatatcgacctg
catttgctccacgaggtgacctcgccgcaggcgtttgccgggatgatcgctgcggggcgg
ccggtgcggcgccccgagcgggcgctggcgttatccgatcataatgtgccgaccgtcggt
caggcacaggggcccgccggcgtcgccgacgccgaggcgcgcgcgcaactcgaggcgctg
gtcagcaatacgcggcgcttcgggatcgaaaatttcccgatgggcgatccgcgtggtggc
atcgtccatgtggtcggccccgagcagggacgatcgcagccggggatgacgatcgtctgc
ggtgacagccacacgtcgacgcacggcgcttttggggcgctcgcgttcgggatcggcacg
tcggaggtcgagcatacgcttgcgacgcagacgatccgccagcgccggtcgctcaacatg
cgcgttaccgtcgacgggctgctagcaccgcacgtccatgcaaaggatctcgcgctacac
ctgctcggcgtggtcggtgtcgacggggcggcagggcatgtcatcgaatatgccggcgaa
gccgtccgcgcgctgtcgatggaggcgcggatgacattgtgcaacctcagcatcgagatg
ggcgcgcgcgcaggactggtcgcgcctgatacgacgacatttgcctatctggaggggcgg
cccgcggtgccgacgggacctgattgggacacggcgaccgcgcgctggcaggcgctgggg
agtgacgacgaagcggtattcgaccgtgagttttgggtcgacgcacgcgacgtccagccg
atggtaagctggggtaccaacccttcgcaagtcgtcgcgatcgatggatatatccccgat
ccggcggcgctgacggacgtcgatgcgcgcatggttgccggacgcgcgctggcctatatg
gacttggtgcccggcacgcctgtcgccgggctgcggctcgaccgcgtgttcatcggcagc
tgcacgaatagccggatcgaagacctgcgcgtggttgtggaggtcgtgcgcggccgccgc
gtggcaccgcacgttcgggcgatggtcgttccgggatcggggctggtgaaaagacaggcc
gaggaagaggggatcgaccgcgtgctgcgcgatgcgggtttcgactggcgcgaacccggc
tgctcgatgtgcgtcggcatgaacgccgaccggctgcagcccggcgaacgctgcgccgcg
acgtcgaaccgcaatttcgaaaacaggcaggggcgcggtggacggacccacctgatgagc
cccgcgctggctgcggcgagtgcgattgcgggctgcatcgcggcccccgaaatgccgggt
tag
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