KEGG   Sphingopyxis fribergensis: SKP52_07055
Entry
SKP52_07055       CDS       T03542                                 
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk00260  Glycine, serine and threonine metabolism
sphk00460  Cyanoamino acid metabolism
sphk00630  Glyoxylate and dicarboxylate metabolism
sphk00670  One carbon pool by folate
sphk00680  Methane metabolism
sphk01100  Metabolic pathways
sphk01110  Biosynthesis of secondary metabolites
sphk01120  Microbial metabolism in diverse environments
sphk01200  Carbon metabolism
sphk01230  Biosynthesis of amino acids
sphk01240  Biosynthesis of cofactors
sphk04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SKP52_07055 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    SKP52_07055 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SKP52_07055 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    SKP52_07055 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    SKP52_07055 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    SKP52_07055 (glyA)
Enzymes [BR:sphk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     SKP52_07055 (glyA)
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: AJA08333
UniProt: A0A0A7PGH2
LinkDB
Position
complement(1481950..1483257)
AA seq 435 aa
MTTDTLAKPIKSAGYFTDGVGTVDPAVAAAMKHELEREQYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGRRYYQGCAPSDEVETLAIDRAKQLFDCGYANVQPHSGAQANGAVMLA
LTKPGATILGMSLDAGGHLTHGAPPAMSGKWFNAVQYGVRADDHLVDFDQVEALAKEHRP
ALIIAGGSAYPRTLDFARFRKIADDVGALLMVDMAHFAGLVAGGVHPSPMEHAHVVTTTT
HKTLRGPRGGMILTNDDAIAKRINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKDYAK
ATVANAQALAGRLKDRGADVVAGGTDTHLALIDLRPLGVTGRDADEALERSAITCNKNGI
PFDPLPPVKTSGIRVGSPAGTTRGFGIAEFEEIGDMVADVLEALRDKGEHGDADVEANVR
GRVRALCERFPIYQG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgaccacagacacgctcgcaaagcccatcaaatcggccggctatttcaccgatggcgtc
ggcacggtcgatcccgcagtcgcggcggcgatgaagcatgaactcgaacgcgaacaatat
cagatcgaactgatcgcgagcgagaatatcgtctcgaaggcggtgctcgaagcgcagggt
tcggtgttcaccaacaaatatgccgagggttaccccggccgccgttactatcagggttgc
gcgccgtcggacgaggtcgaaaccctcgcgatcgaccgcgccaagcagctgttcgattgc
ggctatgccaatgtccagccgcattcgggcgctcaggcgaacggcgcggtgatgctcgcg
ctgaccaagcccggcgcgacgatcctcggcatgagcctcgacgccggcggccacctgacc
cacggcgcgccgcccgccatgtcgggcaaatggttcaacgcggtgcaatatggcgtgcgc
gcagacgatcatctcgtcgacttcgatcaggtcgaggcgctggcgaaggaacatcgcccc
gcgctcatcatcgcgggcggctcggcctatccgcgcacgctcgatttcgcgcgcttccgc
aagattgccgacgatgtcggcgcgctgctgatggtcgacatggcgcattttgcgggcctc
gtcgccggcggcgtccatccctcgccgatggaacatgcgcatgtcgtcacgacgacgacg
cacaagacgctgcgagggccgcgcggcggcatgatcctgaccaatgacgacgcgatcgcc
aagcgcatcaattcggcggtcttccccggtctgcagggcggcccgctgatgcacgtcatc
gccgccaaggcggtggcgttcggcgaagctttgcgccccgagttcaaggattatgccaag
gcgaccgtcgccaatgcgcaggcactggccggccgcctcaaggaccgtggcgccgatgtc
gtcgcgggcggcaccgacacgcatctggcgctgatcgacctccgcccgctcggcgtcacc
ggccgcgacgccgacgaggcgctcgaacgcagcgcgatcacttgcaacaagaacggcatt
ccgtttgacccgctgccgccggtgaagacgagcggcatccgcgtcggatcgcccgccggc
acgacgcgcggcttcggcatcgccgaattcgaggaaatcggcgatatggtcgccgatgtg
ctcgaggccctgcgcgacaagggcgagcatggcgacgccgatgtcgaggcgaatgtccgc
ggccgcgtccgcgcgctgtgcgaacgcttccccatctatcagggataa

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