Sphingopyxis fribergensis: SKP52_07055
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Entry
SKP52_07055 CDS
T03542
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00260
Glycine, serine and threonine metabolism
sphk00460
Cyanoamino acid metabolism
sphk00630
Glyoxylate and dicarboxylate metabolism
sphk00670
One carbon pool by folate
sphk00680
Methane metabolism
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
sphk01230
Biosynthesis of amino acids
sphk01240
Biosynthesis of cofactors
sphk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SKP52_07055 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SKP52_07055 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SKP52_07055 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SKP52_07055 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SKP52_07055 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SKP52_07055 (glyA)
Enzymes [BR:
sphk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SKP52_07055 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJA08333
UniProt:
A0A0A7PGH2
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All DBs
Position
complement(1481950..1483257)
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AA seq
435 aa
AA seq
DB search
MTTDTLAKPIKSAGYFTDGVGTVDPAVAAAMKHELEREQYQIELIASENIVSKAVLEAQG
SVFTNKYAEGYPGRRYYQGCAPSDEVETLAIDRAKQLFDCGYANVQPHSGAQANGAVMLA
LTKPGATILGMSLDAGGHLTHGAPPAMSGKWFNAVQYGVRADDHLVDFDQVEALAKEHRP
ALIIAGGSAYPRTLDFARFRKIADDVGALLMVDMAHFAGLVAGGVHPSPMEHAHVVTTTT
HKTLRGPRGGMILTNDDAIAKRINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKDYAK
ATVANAQALAGRLKDRGADVVAGGTDTHLALIDLRPLGVTGRDADEALERSAITCNKNGI
PFDPLPPVKTSGIRVGSPAGTTRGFGIAEFEEIGDMVADVLEALRDKGEHGDADVEANVR
GRVRALCERFPIYQG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagacacgctcgcaaagcccatcaaatcggccggctatttcaccgatggcgtc
ggcacggtcgatcccgcagtcgcggcggcgatgaagcatgaactcgaacgcgaacaatat
cagatcgaactgatcgcgagcgagaatatcgtctcgaaggcggtgctcgaagcgcagggt
tcggtgttcaccaacaaatatgccgagggttaccccggccgccgttactatcagggttgc
gcgccgtcggacgaggtcgaaaccctcgcgatcgaccgcgccaagcagctgttcgattgc
ggctatgccaatgtccagccgcattcgggcgctcaggcgaacggcgcggtgatgctcgcg
ctgaccaagcccggcgcgacgatcctcggcatgagcctcgacgccggcggccacctgacc
cacggcgcgccgcccgccatgtcgggcaaatggttcaacgcggtgcaatatggcgtgcgc
gcagacgatcatctcgtcgacttcgatcaggtcgaggcgctggcgaaggaacatcgcccc
gcgctcatcatcgcgggcggctcggcctatccgcgcacgctcgatttcgcgcgcttccgc
aagattgccgacgatgtcggcgcgctgctgatggtcgacatggcgcattttgcgggcctc
gtcgccggcggcgtccatccctcgccgatggaacatgcgcatgtcgtcacgacgacgacg
cacaagacgctgcgagggccgcgcggcggcatgatcctgaccaatgacgacgcgatcgcc
aagcgcatcaattcggcggtcttccccggtctgcagggcggcccgctgatgcacgtcatc
gccgccaaggcggtggcgttcggcgaagctttgcgccccgagttcaaggattatgccaag
gcgaccgtcgccaatgcgcaggcactggccggccgcctcaaggaccgtggcgccgatgtc
gtcgcgggcggcaccgacacgcatctggcgctgatcgacctccgcccgctcggcgtcacc
ggccgcgacgccgacgaggcgctcgaacgcagcgcgatcacttgcaacaagaacggcatt
ccgtttgacccgctgccgccggtgaagacgagcggcatccgcgtcggatcgcccgccggc
acgacgcgcggcttcggcatcgccgaattcgaggaaatcggcgatatggtcgccgatgtg
ctcgaggccctgcgcgacaagggcgagcatggcgacgccgatgtcgaggcgaatgtccgc
ggccgcgtccgcgcgctgtgcgaacgcttccccatctatcagggataa
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