Sphingopyxis fribergensis: SKP52_07435
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Entry
SKP52_07435 CDS
T03542
Name
(GenBank) two component, sigma54 specific, Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sphk02022
]
SKP52_07435
Two-component system [BR:
sphk02022
]
NtrC family
Unclassified
SKP52_07435
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
HTH_28
Mg_chelatase
HTH_29
AAA_16
HTH_23
HTH_17
AAA_2
HTH_30
HTH_1
HTH_22
AAA
cREC_REC
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AJA08408
UniProt:
A0A0A7PGN7
LinkDB
All DBs
Position
1560961..1562337
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AA seq
458 aa
AA seq
DB search
MTEGGANLRKLLVVEDDPGLQTQLKWAYEDYQVFVAGDHDAAIELLRAEEPDVVTLDLGL
PPDPDGTREGFRTLKAIIEAKPDTKVIVVSGHGERASALAAIASGAWDFYQKPIDIDELG
LIVARAFHVRELEVENARLASQGSNDNRVLGGMITGAPEMQKVARTIERVANLDVSVMLL
GASGTGKELLARGLHEASGRRDGAFVAINCAAIPENLLESELFGHEKGAFTGAVKTTEGK
IELAHGGTLFLDEVGDIPLPLQVKLLRFLQERTIERIGGRKAIAVDTRIVCATHRDLDTM
IAEQSFRDDLYYRLAEMVVKIPSLSERPGDAVLLARHFLHQYAPQMNPGVRGFAPDALQA
IDEGRWPGNVRELENRIKRAVIMADGKLVMREDLDMTGGEEEGEEAWLNLRSAREAADRV
AIRRAMTQSEGNISAAAKLLGISRPTLYDLLKQYRMHA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcggggccaatttgcgcaaattgctggtggtcgaggacgaccccgggctg
cagacgcagctcaaatgggcgtatgaggattatcaggtcttcgtcgcgggcgaccatgat
gccgcgatcgaattgctgcgcgccgaggaacccgatgtggtgacgctcgacctgggcctg
ccgcccgatcccgacggcacgcgcgaagggttccggacgctgaaggcgatcatcgaggcc
aagcccgataccaaggtcatcgtcgtgtcggggcatggcgaacgcgcgagcgcgctggcg
gcgatcgcgagcggggcgtgggatttctaccagaagccgatcgacatcgacgaactgggg
ctgatcgtggcccgcgctttccatgtgcgcgaactcgaggtcgagaatgcgcggctcgca
agccagggttcgaacgacaatcgcgtgctcggcgggatgatcaccggggcgcccgagatg
cagaaggtcgcgcggacgatcgaacgcgtcgcgaatctcgatgtcagcgtgatgctgctc
ggcgcgagcggcaccggcaaggaattgctcgcgcgcgggctgcacgaggcgagcgggcgg
cgcgacggagcgtttgtcgcgatcaactgcgcggcgatccccgaaaatctgctcgaaagc
gagctgttcgggcacgaaaagggcgcgtttaccggcgcggtgaagacgaccgagggcaag
atcgaactggcacatggcgggacgctgtttctcgacgaggtcggcgatattccgctgccg
ttgcaggtcaagctgctgcgattcctgcaggagcggacgatcgagcggatcggcgggcgt
aaggcgatcgcggtcgacacgcgcatcgtctgcgcgacgcaccgcgacctcgatacgatg
attgccgagcaaagtttccgcgacgatctgtattaccggctcgccgagatggtggtgaag
atcccgtcgctgtccgaacggccgggcgacgcggtgctcctcgcgcggcacttcctccac
caatatgcgcctcagatgaaccccggggtgcgcggcttcgcgcccgacgcgctgcaggcg
atcgacgagggccgctggccgggcaatgtccgcgagcttgaaaaccgcatcaaacgcgcc
gttatcatggccgacggcaagctggtgatgcgcgaggacctcgatatgacgggcggcgag
gaagagggcgaggaggcgtggctgaacctgcgcagcgcgcgcgaggccgccgaccgcgtc
gcgatccgccgcgcgatgacgcagagcgagggcaatatttcggcggcggccaagctgctc
gggatcagccggccgacgctgtacgacctgctcaagcaatatcggatgcacgcctga
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