Sphingopyxis fribergensis: SKP52_07875
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Entry
SKP52_07875 CDS
T03542
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_07875
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_07875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AJA08494
UniProt:
A0A0A7PET3
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All DBs
Position
1636998..1639358
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AA seq
786 aa
AA seq
DB search
MLKRTYLLSSIALFVLPMTAHAQEAPQPDDAAAANDEIVVTGTAGGGINRQDAAFAITSI
NSDAIDRAAPNSTADLFKVIPGVSAESSGGQNGANIFVRGYPSGGDAEFVTLTVQGVPFF
SPPTLSFLENTQLIRIDETIERVEAVRGGTGALFGNGQPGLTVNFVQKEGGRDFEGLVKA
SITDYGDLRGDMLLSGPFGENTSFMVGGYYSSGEGIRSPGFTAEKGGQITGNIRHDLNKG
SILVFARYLKDRGQWLLPIPVIRDGDKVRQFGNIDPGTGVLAGPETRLAVLPDGTRTDLA
DGRGADLINLGTNFDYEIGDGFQLRYRASYLKGDADTTGLVPASTATTADAYAASLGSTV
GSLTYVNGGQAVAGSQQVIRAGTWIVRKQIEDFTNDLAVEWDSGNNKFTVGAYYSDFSSN
DQWNLGNVHLLTAENHGRLLDLTLGNGQVATNNGYTQGSFFNVNAAYDGREYAFYAVDEF
QITPELRLDAGLRYQNYKATGTIENNSSVDIDGDPDTLYDNGTAVLNGTFRNIAYKKGAW
SWTAGLNYDFSSSVGAYVRYNRGNTNPFFDNLRDGIFVSPRVDNFEGGVKVRTDLVSLYA
TLFHTKFKGLSTTVITDGAPIASVGGARSTGVELEGQIRPVDNFSIAFSGTWLNAKYRDF
FTDGGATDLSGNRVQRQPKWQWRVTPAYDIPFGDDGKVSLYSTFSYVGDRFSDTANVQSL
PNYFKIDAGISVDVNRALSFAVTADNLTDKVGLTEGDPRQLGGGSEVVNARPILGRSFRF
SAAYKF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcggacttatctgctgtcgtcgatcgcgctgttcgtgctgcctatgacggcc
cacgcccaggaagcgcctcagcccgacgatgcggcggcggcgaacgacgaaatcgtcgtc
accggcaccgccggcggcggcatcaatcggcaggacgcggccttcgcgatcaccagcatc
aattcggacgcgatcgaccgcgcggcgccgaacagcaccgccgacctgttcaaggtcatc
cccggcgtgtcggccgaaagctcgggcggccagaatggcgcgaacatcttcgtgcgcggc
tatccgtcgggcggtgacgccgaattcgtcacgctgacggtgcagggcgtgcccttcttc
tcgccgccgaccttgtcgttcctcgaaaacacccagctgatccgcatcgacgaaacgatc
gagcgcgtcgaagcggtgcgcggcggcaccggcgcgctgttcggcaacggccagcccggc
ctgaccgtcaacttcgtccagaaggaaggcgggcgcgatttcgagggcctcgtgaaggcg
agcatcaccgattatggcgacctgcgcggcgacatgctgctgtcgggcccgttcggcgaa
aacaccagcttcatggtcggcggctattattcgagcggcgagggtattcgcagccccggc
ttcaccgccgaaaagggcgggcagatcacgggcaatatccgccacgatctcaacaaggga
tcgatcctcgtctttgcgcgctacctcaaggatcgcggccagtggctgctgccgatcccg
gtgatccgcgacggcgacaaggtgcgccagttcggcaatatcgatccgggcaccggcgtc
ctcgcgggccccgaaacccggcttgcggtgctgcccgacggcacgcggaccgacctggcc
gacgggcgcggcgccgacctcatcaacctgggcaccaatttcgattatgagatcggcgac
ggtttccagctgcgctatcgcgcgagctatctgaagggggatgccgatacaacggggctc
gtccccgcgagcacggcgacgaccgccgacgcctatgccgcctcgcttggcagcacggtc
ggcagcctgacctatgtgaacggcggtcaggccgtggcgggaagccagcaggtgatccgc
gcgggcacctggatcgtgcgcaagcagatcgaggatttcaccaacgacctcgcggtcgaa
tgggacagcggaaacaacaaattcaccgtcggcgcctattattcggatttctcgtcgaac
gatcagtggaacctcggcaacgtccacctgctgaccgcggaaaaccacggccgcctgctc
gacctcaccctcggcaacgggcaggtcgcgacgaacaacggctatacccaaggctcgttc
ttcaacgtcaacgccgcttatgacggccgcgaatatgccttttacgcggtcgacgagttt
cagattacgcccgaactgcggctcgatgcaggcctccgttaccagaattacaaggcgacg
gggacgatcgagaacaacagctcggtcgacatcgacggcgatcccgacacgctctacgac
aatggcaccgcggtgctgaacggcaccttccgcaatatcgcatataaaaagggcgcctgg
tcgtggaccgcggggctcaactacgacttctcgtcgtcggtcggcgcctatgtccgttac
aaccgcggcaacaccaaccccttcttcgacaatctgcgcgacgggattttcgtgtcgccg
cgcgtcgacaatttcgagggcggggtaaaggtccgcaccgacctcgtctcgctctatgcg
acgctgttccatacgaagttcaagggcctgtcgacgacggtcatcaccgacggcgcgccg
atcgcgtcggtgggcggtgcgcgcagcacgggggtcgagctcgaaggtcagatccggccg
gtcgataatttttcgatcgccttttcgggcacctggctgaacgcgaagtatcgcgatttc
ttcaccgatggcggggcgaccgacctgtcgggcaaccgggtgcagcggcagccgaagtgg
caatggcgcgtgacccccgcctatgacattccgttcggagatgacggcaaggtctcgctc
tattcgaccttctcctatgtcggcgaccgtttctccgacacggcgaacgtccagtcgctg
cccaattatttcaagatcgacgccgggatcagcgtcgatgtgaaccgggcgctcagcttt
gcggtaaccgcggacaatctgaccgacaaggtcgggctgaccgagggcgacccccgccag
ctcggcggcggcagcgaagtcgtcaacgcgcggccgatcctcggccggtcgttccgtttc
agcgccgcctataaattctga
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