Sphingopyxis fribergensis: SKP52_07905
Help
Entry
SKP52_07905 CDS
T03542
Name
(GenBank) putative TonB dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_07905
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_07905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AJA08500
UniProt:
A0A0A7PEQ3
LinkDB
All DBs
Position
1646173..1648800
Genome browser
AA seq
875 aa
AA seq
DB search
MNRGKLMRAALLVLLSTTAALPAQAQEAGAGDSASDDRDEIIVTANRRAENSQDVSGVVQ
ALGADQLRQDGIAELRQLQVAVPGLSIANQEGNVEIFIRGVGSANNTELGDPGAAPHLNG
TYIPRPRGLGLMFYDLDRVEVNKGPQGTLYGRNALAGTLNIITAKPRLGEFSGYAQAEIA
NRSSYGAEGAINIPLGETFALRAAGYYVNRDYGFKNVSTGAPANELKPAGLEENYAGRLS
LLWEPSDRLSISIVGDYGKETGTGYPGANIFSAVVGSGLRPDKLNLKHVVYRGLQGDMEN
ELWGVQGKINYDFGSFGAELTGSYRSVDFYQVNASSDGIDYPGRDLSAVQYDNYSGNFWQ
TKSKSQIYEARLFANDDQRLRWNLGAFYFNEDQAVGYLALADRGYCCYSATEFTMPDVNG
ESYAFYADGTYDVADRLRFLAGIRYTEEKKSRYGIGGNWALTLGGENFDCCFATRVGTEG
FRPALLDRPNFDVSNITTPQGMAQFLIEGIKTPGLRDTLIDQIGAIANGTNPNGTCIDRP
DIDNGFVNCPALNPSNTNGGFSYANLTIPGQQSGSSKFNFIDWRFGLEYDLSDNNMLYAK
VSTGHKSGGFNDSFNGSPIPETFSPEKLLVYEVGTRNSFDFFGRRAVVNLTGFYYDYSNQ
VFQDLTCINLDSTQTPPVCNGYSLVNRNIGASRIFGAEAEMRFKLPGNFGLDINAAYLDT
KVTRGTVADARAQDFGAGGNSPLISLVGNRLPLASKMNISARLSQWFDAGPGRLDWQVLL
NYRSSYFLSQFNEDDIVFLDGTRQSALAAGFPDRQKGYATLNLGIGYTIDNFRLEAWASN
FLNEEVSQKALVGSSLNIRFLNDARSYGLRVRVNF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggggtaaattgatgcgtgccgcgctgctggtgctgctttcgacgaccgcggcg
ctgcccgcgcaagcgcaggaagccggagcaggggatagcgcgagcgacgaccgtgacgag
atcatcgtcaccgcgaaccgccgcgcagaaaattcgcaggacgtgtcgggcgtcgtgcag
gcgctgggcgccgatcagttgcgccaggacggcatcgctgagcttcgccagcttcaggtt
gcagtgccgggtctcagcatcgccaaccaggaaggcaatgtcgaaatcttcatccgcggc
gtcggctcggcgaacaacaccgagcttggcgatccaggcgccgcgccgcatctcaacggc
acttatatcccgcgcccgcgcgggctcgggctgatgttctacgacctcgaccgcgtcgag
gtgaacaagggcccgcagggaacgctttatgggcgcaacgcgctcgcgggtacgctcaat
atcatcaccgcaaagccgcggctcggcgagttcagcggctatgcgcaggccgaaatcgcc
aatcgctcctcctatggcgcggaaggtgcgatcaacattcccttgggcgaaaccttcgcg
ctccgcgcggcgggctattatgtcaaccgcgactatggcttcaaaaatgtctcgaccggc
gcaccggcgaacgagctcaagcccgcgggtctcgaagaaaactacgccggacgcctgtcc
ctgctctgggaaccgagcgaccggctcagtatctcgatcgtcggagactatggcaaggaa
acgggcaccggctatccgggtgccaatatcttcagcgctgtcgttggaagcggtctgcgt
cccgacaagctcaatctcaagcatgtcgtctaccgcgggctgcaaggtgacatggagaat
gagctctggggcgtccagggcaagatcaactatgatttcggaagctttggcgccgaactg
acgggcagctatcgctcggtcgatttctatcaggtcaacgcctcgagcgacgggatcgac
taccccggccgcgacctctcggcggtccagtacgacaattattcgggcaatttctggcag
actaaatcgaagagccagatctatgaggcccgcctgttcgcgaacgacgaccaacgcctg
cgctggaacctcggtgccttctatttcaacgaagaccaggccgtcggttatctcgcgctc
gccgaccgcggctactgctgctactcggcgaccgaatttacgatgcccgatgtcaacggc
gagagctatgccttctacgccgacggcacctatgatgtcgccgatcgcctccgcttcctc
gccggcatccgctacaccgaggaaaagaaatcgcgctacggtattggcggcaactgggcg
ctcacgctcggaggagagaatttcgattgctgcttcgcgacccgcgtcgggaccgagggc
ttccggcccgcgctgctcgaccggcccaacttcgatgtttcgaatatcacgacgccgcag
ggcatggcgcagttcctgatcgaagggatcaagacgccgggccttcgcgacacgctgatc
gaccagatcggcgcgatcgccaacggcaccaatccgaacggcacctgtatcgaccggccc
gatatcgacaatggcttcgtcaactgcccggcgctcaatccgtcgaacaccaacggcggc
ttcagctatgctaacctgaccattcccggtcagcagagcggcagctcgaagttcaatttc
atcgattggcggttcggcctagaatatgacctcagcgacaacaatatgctctacgcaaag
gtttcgacgggtcacaagtcgggcggcttcaacgacagcttcaacggctcaccgatcccc
gagaccttcagccccgaaaagctgctcgtctacgaagtcggcacacgcaacagcttcgat
ttcttcggacgccgggcggtcgtcaacctgaccggcttctattacgactattcgaaccag
gtcttccaggaccttacctgcatcaatctcgacagcacccagacgccgccggtctgcaac
ggctattcgctcgtcaaccgcaacatcggcgcttcgcggatctttggtgccgaggccgaa
atgcggttcaagctgccgggtaatttcggactggatatcaatgccgcctatctcgacacc
aaagtcacccgcggcactgtcgccgacgcgcgcgcgcaggactttggcgcaggcggaaat
tcgccgctgatcagtctcgtcggaaatcgcctgccgctcgcgtctaaaatgaatatcagc
gcacggctgtcgcaatggttcgacgcgggtccaggtcgtctcgattggcaggtgctgctg
aactaccgctcatcctacttcctcagccagttcaacgaagatgatatcgtctttctcgac
gggacgcgccagagtgcgttagctgcgggcttcccggaccggcagaaaggctatgcaacg
ctcaacctcggcatcggctatacgatcgacaattttcgcctcgaagcttgggcgagcaac
tttctcaatgaagaagtctcgcaaaaggcacttgtcggatcgtcgctcaatatccgcttc
ctcaatgacgcgcgcagctatggtcttcgcgttcgcgtgaacttctag
DBGET
integrated database retrieval system
