Sphingopyxis fribergensis: SKP52_08260
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Entry
SKP52_08260 CDS
T03542
Name
(GenBank) hemolysin-type calcium-binding region
Organism
sphk
Sphingopyxis fribergensis
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Gene cluster
GFIT
Motif
Pfam:
An_peroxidase
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AJA08571
UniProt:
A0A0A7PEP0
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All DBs
Position
1740044..1745827
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AA seq
1927 aa
AA seq
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MVTYIRSDLEFILDQIKIAEAHAAGQPLYGPGGLVPAYNLSFGLRTVDGSYNHLLPGQEQ
WGAANQPFPTLLDPVYRPADGTPFDPDGPGPAPAMPTSPNYNPSDDPNSLVFDSSLRTIS
NLLVDQTLGNPAAILEGLARAGSDDALADLPLVTAIYQAFKPASDAEYQARVVLQNAQTA
ATVANDGLPGDTPAELAAQAALAAATAAHDVTVADLEAARVVRDAALVPFGLEMDGDNVH
LPNISPDGGLSASFNSWFTLFGQFFDHGLDLINKGGSGTVFIPLQPDDPLYVEGSHTNFM
VLTRATVSAGTDGIMGTADDVRPINTTSPYVDQNQTYTSHASHQVFLRQYALNADGHPVA
TGKLIEGAGGSPGGMATWGEVKAQALMLGIQLTDQDVGKVPLLRTDAYGNFIPNAAGYAQ
VITGVGLDGIPNTADDVVISGTPDAPVGLATAIRTNSAFLADIAHNAVPNGIEDGDITIG
LDNPGNNPLVYDNELLDAHFMAGDGRVNENIGLTAVHHVFHAEHNRLVEHTKEVVLASGD
LAFLNEWLVDDVASLPTPAEVEDLVWDGERLFQAAKFGTEMQYQHLVFEEFARKIQPQVD
IFIVPDGFDTTINPDIVAEFAHVVYRFGHSMLTEDISRFGPTFTPDDISLIDGFLNPTAF
NGAGGVIEDGLAAGDIVRGMTRQVGNEIDEFVTSALRNNLLGLPLDLATINLARGRDTGV
PSLNAARREFYEVTNNDARLKPYESWVDFAGNLKNEASIINFIAAYGTHELITGETTVEG
KRAAAMAIIFGVDQSILDDPNTPANEARTIVAPADATAFLNGELFIGDPDDPLDNVDWSS
GPNGVTTTGLDDIDLWIGGLAEKILPFGGMLGSTFNFVFEVQMEQLQNADRFYYLQRLDG
LHLFSEMEGNSFASMIMRHTNATHLPSDVFSTPGLLLEVDRTKQFNDLDGDGDLESDDPT
GGGILTPLVVRNNPGTVGPDTNYLRYTGGDHVVLGGTDGADIIIASEGDDTIFGDGGNDT
LEGGAGNDIINAGAGDDVVRDLGGDDNIKLEDGHDVVNTGPGLDLVMGGRGQDFIVLGND
AGTEVFAGEGNDFILGNITAERILGNEGDDWIEHGTFDGAPGDNFDEIFAQDGVVGHDVF
FGLGGFDEFIGEGGDDIMVGSPGRAKMAGMSGWDWAIYKDNNAATDADLTRGIVFDENPT
PPQNATLDAYESIEGLSGSRFNDILSGSNVIAAERAPFDQGGSEGYTGSRLDAAGIARIA
GLQDVLGTGVTLYDAGDIILGGDGSDVIRGNAGDDIIDGDKWLNVRISVRENVGPNGGTG
AEIATADSMTQLVTQMFNRTYNPGQLVIVREILTDLTAGDTDIAVFSDLRANYDITYNAN
GTISVAHARGTQVDGTDNLRNIERMRFSDIEIGVNQPVTGQAVISDLTPTEGQLLTVNTA
TIADGNGLGTFGYQWQQSANGVAWANIAGATNATFTPNNPGGTTFGAQAGLQLRVVVSFT
DGGGTAEQVISAATGPTGVDWDGNGNNNTLAGTAGDDIGDGGGGNDTLNGNDGNDLLNGE
GGNDTVNGGQGNDVLNGGGGNDTVTGGQGVDTMSGGAGNDTLTGGAGNDTIDGNGGDDVA
VFAGAVGNYSITTSGTSFVVTDNVGAEGVDTVSNVETLRFNGANYAVVTGGAGNNNNVNG
ANGAAGSQAVFGFGGNDTINGGAGNDIINGGDGNDTITQTGSTGGRDLVDGGAGNDTYVL
VGVGGAETFRIYARAAAEAAGITGLNATTEIVITRNGTNNAAIVAELDNIEEININAVNV
TSPGGVLPGGTGGLGGGDTVSVIGDFNPTSLNFNTITVNGGRGADTVDISGLTSDHRLVF
NTGGGADQFVGGARPQDVINSSNGNGNGGSAHQQDNPFQMIRALIDDWMEVNGRHVRHYF
DGDYPFA
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtatatccgcagcgatcttgagttcattctggaccagatcaagattgccgaa
gcccatgccgccggtcagccgctctacggcccgggtgggcttgtccccgcgtataatctt
tcattcggcctgcgcaccgtcgacggcagttacaaccatttgctcccaggccaggaacaa
tggggcgcggcgaaccagcctttcccgacgctgctcgatcccgtctaccggccggccgat
ggcacgccgttcgaccccgatggcccgggtccggctccggcgatgccgacatcgcccaac
tataatccgtccgatgatccgaactcgctcgttttcgacagcagcctgcggaccatctcc
aacctgctggtcgatcagacgctgggcaaccctgccgcgattttggaaggccttgcccgc
gcgggcagcgatgatgccttggccgatcttccgctcgtcacggcaatctatcaagccttc
aaacccgcttcggacgcggaatatcaggcgcgcgtcgtgttgcagaacgcgcagactgcc
gcaaccgtagccaatgacggattgcccggcgatacgccggccgagttggccgcgcaggcc
gcgctggctgccgcgacggccgcgcatgatgttaccgtggccgatctggaagccgcgcgc
gtcgtccgagacgcggcactcgtgccctttggcctcgagatggacggcgacaatgtccat
ttgcccaatatttcgcccgacgggggcttgtcggcctcgttcaactcgtggttcaccctg
ttcggtcagttcttcgaccacggtctcgatctcatcaacaagggcggcagcggcacggtc
ttcattccgctccagcccgacgatccgctctatgtcgagggaagtcacaccaacttcatg
gtgctgacccgcgcgacggtttcggccggcacggacggcatcatgggcaccgccgacgat
gtccggccgatcaatacgacgtctccctatgtcgatcagaatcagacctatacgtcgcac
gcctcgcatcaggtgtttctacgtcaatatgcgctgaacgctgacgggcacccggttgct
acgggcaagctgatcgagggcgcgggcggatcgcccggcggcatggcgacatggggcgag
gtcaaggcgcaggcgctgatgctgggcatccagctgaccgatcaggacgtgggtaaagtg
ccgttgctacggaccgatgcctatggcaatttcattcccaacgccgcgggctatgcacag
gtcatcaccggcgttggcctcgacgggattcccaacacggccgacgacgtcgtgatttcg
ggcacgccggacgcgccggttggcctggccaccgcgattcggacgaacagcgcgttcctg
gccgacatcgcccacaacgcggtgccgaacggcatcgaggatggcgatattacgatcggg
ctcgacaacccgggcaacaatccgctggtttacgacaacgagctgctcgacgcgcatttc
atggcgggcgacggccgcgtgaacgagaatatcggtctgaccgcggttcaccatgtgttt
catgcggagcataaccgcctggtcgaacataccaaggaggtcgtcctggcctcgggcgac
ctggcgttcctgaacgaatggctcgtcgacgacgtcgcatcgctcccgaccccggcagag
gtcgaggatcttgtgtgggacggcgagcgcctgttccaggctgccaaattcggcaccgaa
atgcagtatcagcacctggtgttcgaggaattcgcgcgcaagatccagccgcaggtcgac
atcttcatcgtgcccgacgggttcgatacgacgatcaatccggacatcgtcgccgaattc
gcgcacgtcgtttatcgcttcggccactcgatgctgaccgaagatatatcgcggttcggg
ccgaccttcacgcccgacgatatcagcctgatcgatggcttcctgaacccgacggcgttc
aacggggctggcggtgtgatcgaagacggccttgcagcaggcgacatcgtccgcggcatg
acgcgtcaggtcggcaacgagatcgacgaattcgtcaccagcgcgctgcgcaacaatctg
ctcggcctgccgctcgatctggcgacgatcaacctcgcccgcggccgcgacaccggcgtt
ccttcgctgaatgccgcgcgccgcgaattctatgaagtgacgaacaatgacgcgcggctg
aaaccctatgaaagctgggtcgattttgccggcaacctcaaaaacgaggcgtcgatcatc
aatttcatcgcggcttatggcacgcatgagcttattacgggcgaaacgaccgtagagggc
aagcgtgccgcggcgatggcgatcatcttcggcgtcgaccaaagcattctcgacgatccc
aatacgcctgcgaacgaagcccgcacgattgtcgcgccggcggatgccaccgccttcctc
aacggcgagctcttcattggcgatcccgatgatccgctggataatgtcgactggagcagc
ggtccgaacggcgtgaccacgaccggcctcgacgatatcgacctttggatcggcggcctt
gccgaaaagatactgcccttcggcggcatgctcggctcgaccttcaactttgtcttcgaa
gtgcagatggaacagcttcagaacgccgatcgcttctactatctccagcgtctcgacggc
ttgcacctgttcagcgagatggagggcaattcgttcgccagcatgatcatgcggcatacc
aacgcgacgcatctgccttcggacgtcttctcgacccccggcctgctgctagaggtcgat
cgcactaagcagttcaatgacctggatggcgacggcgaccttgagagcgacgaccctacg
ggcggcggcatcctgactccgctcgttgtccgcaataaccccggcacagtcggtcccgac
acaaattatctccgctacaccggcggcgatcatgtggttcttggcggcaccgacggcgcc
gacattatcatcgcaagcgagggcgacgacacgatcttcggcgatggcggcaacgatacg
ctcgaaggcggcgccggcaacgacatcatcaatgccggtgcgggcgacgacgtcgttcgc
gacctgggcggcgacgacaatatcaagctcgaagacgggcatgatgtggtcaataccggc
cccggcctcgatctcgtgatgggcggccgcggccaggacttcatcgttctgggcaatgac
gcgggcaccgaagtgttcgcgggcgaaggcaatgacttcatcctcggcaacatcaccgcc
gaacgcatcctcggcaacgagggtgacgactggatcgagcatggcacgttcgacggcgcc
cccggcgacaatttcgacgaaattttcgcgcaggacggtgtcgtcggccatgacgtgttc
ttcggcctcggcggcttcgacgagttcatcggcgaaggcggcgacgacatcatggtcggc
agccccggtcgcgccaaaatggctggcatgtcgggttgggactgggcgatctacaaggat
aataacgcggccaccgacgccgacctaactcgcgggatcgtattcgacgagaatcccacg
cctccgcaaaatgcgacgctagacgcgtatgaaagcatcgaggggctgtcggggtcgcgg
ttcaacgatatcctgtcgggatcgaatgtcatcgcggcagagcgcgcgcccttcgaccaa
gggggaagcgaaggctatactggcagcagactcgacgccgctggcatcgcccgcatcgcc
gggctccaggacgtgctcgggacaggcgttaccttgtatgacgccggcgacatcattctt
ggcggcgacggcagcgacgtgatccggggcaatgccggcgacgacatcatcgacggcgac
aaatggctgaacgtgcggatcagcgttcgcgaaaacgtcggtcccaacggcggtactggt
gcggaaatcgcgaccgccgacagcatgacgcaattggtgacgcagatgttcaaccggaca
tataatccgggtcaacttgtgatcgtccgcgaaatcctgactgacttgacggcgggcgac
acggatatcgcggtgttctccgaccttcgggccaattacgatatcacctataatgccaat
gggacgatcagcgtggcgcatgcgcgcggcacgcaggtcgacggcaccgacaatctgcgc
aacatcgaacgcatgcggttctcggatatcgagatcggcgtcaatcagccggtgacgggc
caagccgtcatcagcgatctgacgccgaccgaaggccagttgctgacggtgaataccgcg
acaatcgctgacggaaatgggctcggaacattcggctatcagtggcaacagtcggccaat
ggcgtggcctgggccaatattgccggcgcgaccaacgcgaccttcacgcccaacaatcca
ggcggcacgacgtttggcgcccaggccgggcttcagttgcgcgtcgtggtgagcttcacc
gatggcggcggtacggccgaacaggtcatatccgccgcgaccggaccgaccggggtcgac
tgggacggcaatggcaataacaacacgctcgcgggcaccgcgggcgacgatatcggcgac
ggtggcggcggcaacgacacgctgaacggcaacgacggtaacgacctgctgaacggcgaa
ggcggcaatgacaccgtcaacggcggtcagggcaacgacgtgctgaacggcggcggcggt
aatgacaccgtcaccggcggtcagggtgtcgacacgatgagtggcggggctggcaacgac
acgctgaccggcggcgcgggcaatgacacgatcgacggtaatggcggcgacgacgtcgcg
gtctttgccggagcggtcggaaactacagcatcacgaccagcggaacgtcttttgtcgtc
accgacaacgtcggcgccgagggtgtcgataccgtgagcaatgtcgaaacactccggttc
aatggcgccaactatgcggttgtcaccggaggcgccggcaacaacaacaacgtcaacggc
gctaacggtgccgcaggttcgcaggcggtgttcggctttggcggcaacgacacgatcaac
ggcggcgccggaaacgacatcatcaatggtggcgacgggaacgatacgataacccagacc
ggatccaccggtggcagggatctggtcgatggcggcgccggtaacgacacctatgtgctg
gttggcgtggggggcgcggaaacctttcgcatctatgcccgcgccgcggccgaggcggca
ggcatcactggtctcaatgcgaccaccgagatcgtcatcacccgcaacggcaccaacaat
gccgcgatcgttgctgaactcgacaacatcgaagagatcaatatcaacgcggtcaacgtg
acgtcgccgggaggcgtcctgccgggcggtacgggagggcttggaggtggcgatacggtc
tccgtgatcggcgatttcaatccgacgagcctcaatttcaataccatcaccgtcaatggt
ggccggggcgccgacaccgtcgatatatccggactgacctccgaccatcggctcgtattc
aatacgggcggcggcgcggatcagtttgtcggtggcgcccggccccaggacgtcatcaat
tcctccaacgggaatggcaacggcggttccgcccatcagcaggacaatccattccagatg
atccgggcgctgatcgacgactggatggaagtgaacgggcgccacgtccgccactatttc
gacggggactatccgtttgcataa
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