Sphingopyxis fribergensis: SKP52_08265
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Entry
SKP52_08265 CDS
T03542
Name
(GenBank) type I secretion system ABC transporter, PrtD family
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SKP52_08265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_08265
02044 Secretion system [BR:
sphk02044
]
SKP52_08265
Transporters [BR:
sphk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SKP52_08265
Secretion system [BR:
sphk02044
]
Type I secretion system
Multiple protein transporter
SKP52_08265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA
AAA_25
AAA_16
AAA_22
AAA_30
RsgA_GTPase
AAA_33
TsaE
Zeta_toxin
NB-ARC
Rad17
AAA_5
nSTAND3
DO-GTPase2
AAA_18
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AJA08572
UniProt:
A0A0A7PKV3
LinkDB
All DBs
Position
1745894..1747648
Genome browser
AA seq
584 aa
AA seq
DB search
MRLFWMTVPPALSEAVRACRTHFILAATFSALINILYLAPTIYMMQVYDRVVPTNGVLTL
IFITVVVGVAIATLSALDAIRVRLMTRASLRLDRLLSGEILDRLLARSRARPGDPSTQQA
MREFDLLRQSLAGQAATALFDVPWTPLYLLVAFLIHPILGLLVLAAGSVLVTLAIANERR
SKAKAEEAHQANAAAYESHEAMLRKAEIVRALGMRRALVSRHIQQRSVGLNAVADLQFSG
SRYNGLVKFVRMFMQSFALGVGAWLAINGQISVGAIIAASVLLSRALQPIEQLVGLWPNI
VQSRQALRTLGTLFEQASGPVVRTTLPDPQGQVDLQGVVVRNAEGSAILLKNIFLKLAPG
EVLGVVGPSGAGKTTLARVVAGALTPDLGEIRVDGASMADWDPEELARHIGYLPQDCGLL
PGTISENVSRFGAARGVPQAEVDEQVVIAARLAGVHELILHLPGGYDTCIEGNGHKLSAG
QAQRVALARALYGSPRILVLDEPNSALDSDGEEALSRAIGAAKLQGAAIMIVAHRAAVLA
SADKLAILADGAIVGVGPRDEILQALQNSAAKKNVVPIHEGARP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttctggatgaccgttccaccggcattgtcagaagccgtccgcgcctgtcgg
acccacttcatcctcgcagcaacattcagtgcgctgatcaacattctctatctcgcacca
accatctacatgatgcaggtctacgaccgggttgtgccgaccaatggcgtactgacgctg
atcttcatcaccgtcgtcgtcggcgtcgcgatcgcgacgctgtcggcgctcgatgcgatc
cgtgtccggctaatgacccgcgcatcgctacgcctcgaccggttgctttcgggtgagata
ctggaccggctgcttgctcgatcccgcgcacggcccggcgacccttcgacccaacaggcg
atgcgggaattcgatctgctgcggcagtcgcttgcgggacaggcggccacggccttgttc
gacgtcccgtggacgccgctgtatcttttggtggccttcctcattcacccgattttggga
ttgctggtgctggcggcggggagcgtgctggtcacgctcgcgatcgccaatgaaaggcgc
agcaaggccaaggccgaggaggcgcatcaggccaacgcggcagcttatgaatcgcatgag
gcgatgctacgcaaggcagagattgtgcgggcgctcgggatgcggcgcgcgctggtctca
cgccatatacagcagcgtagcgtcggactgaacgccgtcgccgatcttcagttctcgggc
agccggtataatgggctcgtcaaattcgtacgaatgttcatgcaatccttcgcgctgggc
gtcggtgcctggctcgccatcaacggccagatttcagtcggtgcgatcatcgccgcttcg
gtcttgctgagccgcgctcttcagccgatcgagcaactcgtcggtctctggcccaacatc
gtccagtcgcgtcaggcgcttcgcacactcggtacgttgttcgagcaagcatcgggtccg
gttgtgcgcacgactttgcccgacccgcaggggcaggtggacctccagggggttgtcgtc
cgcaatgccgaaggcagcgcgatcctgctcaagaatatattcttgaagcttgcacccggc
gaggtgctgggcgttgtcggcccgtccggagcaggcaagacgacgctcgcgcgcgtcgtc
gcgggcgcgctgacgcccgacctcggcgaaatccgggtcgatggcgccagcatggccgat
tgggatcccgaagagcttgcgcggcatatcggctatctccctcaggattgcggcctgctg
cctggaacgatcagcgaaaatgtttcgcgtttcggggccgctcgcggcgttccgcaggcg
gaggttgacgagcaggtcgtgatcgccgcgcgcctggcgggggtccatgaactgatcctg
catctgcccggcggatacgacacctgtatcgaaggcaatggccacaaattgtcggcaggg
caggcacaacgcgtcgcgcttgcgcgggcgctctatggcagcccgcgcatcctggttctc
gacgagccgaactcggcgctcgacagcgatggcgaggaggctttgtcgagggccataggt
gccgcgaaactgcaaggcgcggcgatcatgatcgtcgcgcatcgtgcggcggtgctggcg
agcgccgacaagctggcgattcttgccgacggcgcgatcgtgggggtggggccacgcgac
gaaatcctccaggcgctgcaaaattctgcggcaaagaagaatgtcgttcccatccatgaa
ggagcgcggccatga
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