Sphingopyxis fribergensis: SKP52_08840
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Entry
SKP52_08840 CDS
T03542
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00010
Glycolysis / Gluconeogenesis
sphk00020
Citrate cycle (TCA cycle)
sphk00260
Glycine, serine and threonine metabolism
sphk00280
Valine, leucine and isoleucine degradation
sphk00310
Lysine degradation
sphk00380
Tryptophan metabolism
sphk00620
Pyruvate metabolism
sphk00630
Glyoxylate and dicarboxylate metabolism
sphk00640
Propanoate metabolism
sphk00670
One carbon pool by folate
sphk00785
Lipoic acid metabolism
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
sphk01210
2-Oxocarboxylic acid metabolism
sphk01240
Biosynthesis of cofactors
Module
sphk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sphk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SKP52_08840 (lpd)
00020 Citrate cycle (TCA cycle)
SKP52_08840 (lpd)
00620 Pyruvate metabolism
SKP52_08840 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
SKP52_08840 (lpd)
00640 Propanoate metabolism
SKP52_08840 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SKP52_08840 (lpd)
00280 Valine, leucine and isoleucine degradation
SKP52_08840 (lpd)
00310 Lysine degradation
SKP52_08840 (lpd)
00380 Tryptophan metabolism
SKP52_08840 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SKP52_08840 (lpd)
00670 One carbon pool by folate
SKP52_08840 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphk04147
]
SKP52_08840 (lpd)
Enzymes [BR:
sphk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SKP52_08840 (lpd)
Exosome [BR:
sphk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SKP52_08840 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
FAD_oxidored
GIDA
HI0933_like
FAD_binding_3
AlaDh_PNT_C
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
3HCDH_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AJA08680
UniProt:
A0A0A7PFC9
LinkDB
All DBs
Position
complement(1860502..1861899)
Genome browser
AA seq
465 aa
AA seq
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MADTNYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEI
YHYMQHAGDYGLIAQQISADIDAVVKRSRGVAKQLSQGVAFLMKKHKITVHMGEGKLTAP
GKLEVKGEKGTETLSAKNIIVATGARARDLPFAPADGKRIWTYRHALVPPEMPKKLLVIG
SGAIGIEFASFYSDMGADVTVVEMLDRVVPVEDADVSAFLEKSLKKQGMTIFTGAGVEEL
KATATGVTAKIKTKDGKTESAEFSHAIVAIGIVPNTENIGLEALGVKTTKGHIDTDAMCR
TNVPGIWAIGDVTAPPWLAHKAMHESVISVEAIAGGHPHAMDPRNIPGCTYCRPQIASVG
LTEAKAKELGYEVKVGTFPFIGNGKAIALGESEGFTKTVFDAKTGELLGAHMIGAEVTEL
IQGYTIGKTAELVEDDFIGTVFPHPTLSETMHEGVLAAFGRPLHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacacgaattacgacctcatcgtcctcggctcgggtcccggcggctatgtcgcg
gcgatccgcgcggcgcaattgggcctgaaaaccgcgatcgtcgaacgcgagaatctcggc
ggcatttgcctcaactggggctgcatcccgaccaaagcactgctgcgctcggccgaaatc
tatcattatatgcaacatgcgggtgactacggcctgatcgcgcaacagatcagcgccgac
atcgacgcggtcgtgaagcgcagccgtggcgttgcaaagcagctcagccagggcgtcgcc
ttcctgatgaagaagcacaagattaccgtccatatgggcgagggcaagctgaccgcgccc
ggcaaattggaagtgaagggcgagaaggggaccgaaaccctttccgccaagaatatcatc
gtcgcgaccggcgcacgcgcccgcgacctgccgttcgcgcccgccgacggtaagcgcatc
tggacctatcgccatgcgctcgtcccgcccgaaatgcccaagaagctgctcgttatcgga
tcgggtgcgatcgggatcgaatttgcgagcttctacagcgacatgggcgctgacgtgacc
gtggttgaaatgctcgatcgcgtggtgccggtcgaggatgccgatgtgtcggccttcctc
gaaaaatcgctcaagaagcagggcatgacgatcttcaccggcgccggcgtcgaggaattg
aaggcgaccgcgaccggcgtcaccgcgaagatcaagaccaaggacggcaagaccgaatct
gccgaattcagccacgcgatcgttgcgatcggcatcgtcccgaacaccgagaatatcggg
ctcgaagcgctcggcgtgaagacgaccaagggccatatcgacaccgacgcgatgtgccgc
accaacgtccccggcatctgggcgatcggcgacgtcaccgcgccgccgtggctcgcgcac
aaggcgatgcacgaatcggtgatttcggtcgaggcgatcgcggggggccacccgcacgcg
atggacccgcggaacatccccggctgcacctattgccgcccgcagatcgccagcgtcggc
ctgaccgaagccaaagccaaggaactcggctacgaggtcaaggtcggcacctttcccttc
atcggcaacggcaaggcgattgcgctcggtgaatccgagggtttcaccaagaccgtgttc
gacgcgaagaccggcgaactgctcggcgcgcacatgatcggcgccgaagtcaccgaactg
atccagggctatacgatcggcaagaccgccgagctggtcgaggatgatttcatcggcacc
gtcttcccgcatcccacgctcagtgagacgatgcacgagggcgtgctcgcggcgtttggg
cgaccgctgcatatttga
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