KEGG   Sphingopyxis fribergensis: SKP52_08840
Entry
SKP52_08840       CDS       T03542                                 
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk00010  Glycolysis / Gluconeogenesis
sphk00020  Citrate cycle (TCA cycle)
sphk00260  Glycine, serine and threonine metabolism
sphk00280  Valine, leucine and isoleucine degradation
sphk00310  Lysine degradation
sphk00380  Tryptophan metabolism
sphk00620  Pyruvate metabolism
sphk00630  Glyoxylate and dicarboxylate metabolism
sphk00640  Propanoate metabolism
sphk00670  One carbon pool by folate
sphk00785  Lipoic acid metabolism
sphk01100  Metabolic pathways
sphk01110  Biosynthesis of secondary metabolites
sphk01120  Microbial metabolism in diverse environments
sphk01200  Carbon metabolism
sphk01210  2-Oxocarboxylic acid metabolism
sphk01240  Biosynthesis of cofactors
Module
sphk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sphk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sphk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SKP52_08840 (lpd)
   00020 Citrate cycle (TCA cycle)
    SKP52_08840 (lpd)
   00620 Pyruvate metabolism
    SKP52_08840 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    SKP52_08840 (lpd)
   00640 Propanoate metabolism
    SKP52_08840 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SKP52_08840 (lpd)
   00280 Valine, leucine and isoleucine degradation
    SKP52_08840 (lpd)
   00310 Lysine degradation
    SKP52_08840 (lpd)
   00380 Tryptophan metabolism
    SKP52_08840 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SKP52_08840 (lpd)
   00670 One carbon pool by folate
    SKP52_08840 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphk04147]
    SKP52_08840 (lpd)
Enzymes [BR:sphk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SKP52_08840 (lpd)
Exosome [BR:sphk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SKP52_08840 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored GIDA HI0933_like FAD_binding_3 AlaDh_PNT_C Lys_Orn_oxgnase Thi4 2-Hacid_dh_C 3HCDH_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: AJA08680
UniProt: A0A0A7PFC9
LinkDB
Position
complement(1860502..1861899)
AA seq 465 aa
MADTNYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEI
YHYMQHAGDYGLIAQQISADIDAVVKRSRGVAKQLSQGVAFLMKKHKITVHMGEGKLTAP
GKLEVKGEKGTETLSAKNIIVATGARARDLPFAPADGKRIWTYRHALVPPEMPKKLLVIG
SGAIGIEFASFYSDMGADVTVVEMLDRVVPVEDADVSAFLEKSLKKQGMTIFTGAGVEEL
KATATGVTAKIKTKDGKTESAEFSHAIVAIGIVPNTENIGLEALGVKTTKGHIDTDAMCR
TNVPGIWAIGDVTAPPWLAHKAMHESVISVEAIAGGHPHAMDPRNIPGCTYCRPQIASVG
LTEAKAKELGYEVKVGTFPFIGNGKAIALGESEGFTKTVFDAKTGELLGAHMIGAEVTEL
IQGYTIGKTAELVEDDFIGTVFPHPTLSETMHEGVLAAFGRPLHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
ttggccgacacgaattacgacctcatcgtcctcggctcgggtcccggcggctatgtcgcg
gcgatccgcgcggcgcaattgggcctgaaaaccgcgatcgtcgaacgcgagaatctcggc
ggcatttgcctcaactggggctgcatcccgaccaaagcactgctgcgctcggccgaaatc
tatcattatatgcaacatgcgggtgactacggcctgatcgcgcaacagatcagcgccgac
atcgacgcggtcgtgaagcgcagccgtggcgttgcaaagcagctcagccagggcgtcgcc
ttcctgatgaagaagcacaagattaccgtccatatgggcgagggcaagctgaccgcgccc
ggcaaattggaagtgaagggcgagaaggggaccgaaaccctttccgccaagaatatcatc
gtcgcgaccggcgcacgcgcccgcgacctgccgttcgcgcccgccgacggtaagcgcatc
tggacctatcgccatgcgctcgtcccgcccgaaatgcccaagaagctgctcgttatcgga
tcgggtgcgatcgggatcgaatttgcgagcttctacagcgacatgggcgctgacgtgacc
gtggttgaaatgctcgatcgcgtggtgccggtcgaggatgccgatgtgtcggccttcctc
gaaaaatcgctcaagaagcagggcatgacgatcttcaccggcgccggcgtcgaggaattg
aaggcgaccgcgaccggcgtcaccgcgaagatcaagaccaaggacggcaagaccgaatct
gccgaattcagccacgcgatcgttgcgatcggcatcgtcccgaacaccgagaatatcggg
ctcgaagcgctcggcgtgaagacgaccaagggccatatcgacaccgacgcgatgtgccgc
accaacgtccccggcatctgggcgatcggcgacgtcaccgcgccgccgtggctcgcgcac
aaggcgatgcacgaatcggtgatttcggtcgaggcgatcgcggggggccacccgcacgcg
atggacccgcggaacatccccggctgcacctattgccgcccgcagatcgccagcgtcggc
ctgaccgaagccaaagccaaggaactcggctacgaggtcaaggtcggcacctttcccttc
atcggcaacggcaaggcgattgcgctcggtgaatccgagggtttcaccaagaccgtgttc
gacgcgaagaccggcgaactgctcggcgcgcacatgatcggcgccgaagtcaccgaactg
atccagggctatacgatcggcaagaccgccgagctggtcgaggatgatttcatcggcacc
gtcttcccgcatcccacgctcagtgagacgatgcacgagggcgtgctcgcggcgtttggg
cgaccgctgcatatttga

DBGET integrated database retrieval system