Sphingopyxis fribergensis: SKP52_09060
Help
Entry
SKP52_09060 CDS
T03542
Name
(GenBank) pyridoxal-5'-phosphate-dependent protein subunit beta
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00260
Glycine, serine and threonine metabolism
sphk00290
Valine, leucine and isoleucine biosynthesis
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01200
Carbon metabolism
sphk01230
Biosynthesis of amino acids
Module
sphk_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SKP52_09060
00290 Valine, leucine and isoleucine biosynthesis
SKP52_09060
Enzymes [BR:
sphk01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
SKP52_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Glycos_transf_3
Motif
Other DBs
NCBI-ProteinID:
AJA08724
UniProt:
A0A0A7PFJ3
LinkDB
All DBs
Position
complement(1911242..1912231)
Genome browser
AA seq
329 aa
AA seq
DB search
MTQQSPEALIDPRRAPTLAGVERAAAKVAALLPQTPLLPLEIEGRTIWCKAECLQPVGAF
KIRGAWHRLTDLSPEQANEGVVGVSSGNHAQGVAWAAKRLGIKATIVMPSNAPAMKLAAT
RGLGAEVVLYDRVTESRDSVAAKLLEERGGTLVHAYGDPWIIEGQGSAGTEAKAQMMARG
IAGPDKVVACCGGGGLSAGLALALPDAEIVAVEPEGWDDVTRSLAAGEILSVEDMAYPTE
CDALQTPETWPINFAVLQARGVRGVVVTRSEVRHAMRTVFEKLHLVVEPGGAAALAAVLA
GKVPLTDATLVTLSGGNVDPLKFAEIITE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcaaagccccgaagccctgatcgacccgcgccgtgcacccacgctcgcaggg
gtcgaacgcgcggcggcgaaagtcgctgcattgctgccgcaaaccccgctgctgccgctc
gaaatcgagggccggacaatctggtgcaaagccgagtgcctgcagcccgtcggcgcgttc
aagattcgcggcgcgtggcaccgcctgaccgacctgagccccgaacaggcgaacgaaggc
gtcgtcggcgtgtccagcggcaatcatgcgcagggcgtcgcctgggcggcgaaacggctg
gggatcaaggcgacgatcgtgatgccgagcaacgcgccggcgatgaagctggcggcgacg
cgcgggctgggcgccgaggtcgtactctacgaccgcgtcaccgaatcgcgtgattcggtc
gcggccaaattactcgaagaacgcggcgggacgctcgtccatgcctatggcgatccgtgg
atcatcgaggggcagggaagcgccgggaccgaagcaaaggcgcagatgatggcgcgcggg
attgccggtcccgataaggtcgtggcttgctgcggcggcggcggtctttcggcgggcctc
gcgcttgcgctgcccgatgccgagatcgtcgcggtcgagcccgagggctgggacgatgtg
acgcgcagccttgccgccggcgaaatcctgtcagtcgaggacatggcttatcccaccgag
tgcgacgcgcttcagacccccgaaacctggccgatcaactttgcggtgttgcaggcgcgc
ggggtgcgcggtgtcgtcgtgacgcgcagcgaggtacgccacgctatgcgcacggtgttc
gagaaattgcacctcgtcgtcgagcccggcggcgcggcggcgctcgccgcggtgctggcg
ggtaaggtgccgttgaccgacgcgacgctcgtcaccctgtcgggcggcaatgtcgatccg
ttgaaattcgcggagattatcaccgaatag
DBGET
integrated database retrieval system
