Sphingopyxis fribergensis: SKP52_09160
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Entry
SKP52_09160 CDS
T03542
Name
(GenBank) lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphk01011
]
SKP52_09160
Enzymes [BR:
sphk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SKP52_09160
Peptidoglycan biosynthesis and degradation proteins [BR:
sphk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SKP52_09160
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GFIT
Motif
Pfam:
SLT
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
AJA08744
UniProt:
A0A0A7PFK8
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Position
1933351..1935111
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AA seq
586 aa
AA seq
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MQNMTKTFISCAVLAAMLAAAPAYAADAGDRNLVAAPQTVPDILSSKQKQLYTQVLTAIR
AQRWADAKSLLDSSENGPLTDFLRAELLTAANSPRAEVADIMPILSRSPWLPQAEQLSRL
AAKRGATDLPTLPSQARLAWAGSAPRRLGADAISDPASAALASSIPDRIKNDDPAGAEAL
LNAAADRLSPEARDEWRQKVAWSYYIENDDANALRLASECSNGHGAWSTQGAWVKGLASW
RTRDYRTALIAFDRVAKEAPDSEQRAAAYYWSARAAIAAGEPASVQQRLRAAAANEETFY
GLLAAETLGVEPNRQRENVRADRSAWRALEDLPNVRAAMALAEIGEDKYADAALRHQARI
GDMRQHEQLLAIAGVLNLPETQLYLAHNTPQGRKPSAQARYPQPKWEPNGGWKVDPALVF
AHTLQESRFQRSVVSPAGAFGLMQVRPGTARDVARWRGDLGTGDLRIPAVNMDMGQSYLQ
YLSKDPSTGGLLPKVIAAYNAGPAPVARWQSEIRDNGDPLLYMESIPYWETRGYVGIVLR
NYWMYEAQQGKPSVSRAALAQGKWPRFPDGKDRTRLSYAGDLSNAD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatatgaccaagactttcatttcatgcgcggttctggccgcgatgctcgctgct
gcgcccgcttacgctgcggatgcaggcgaccgcaatctggtggcggcgccgcaaaccgtt
cccgacatattgtcgtcgaagcagaagcagctttacacgcaggtgctcaccgcgatccgc
gcgcagcgctgggccgatgccaaatccttgctcgacagctcggaaaacggcccgctcacc
gattttctccgcgccgaactgctcactgcggcgaacagcccgcgcgccgaagtcgccgac
attatgccgattctgtcgcgctcgccctggctgccgcaggccgaacagcttagccggctt
gcggcgaagcgcggcgcgaccgatctgccgacgctgccctctcaggcgcgtctggcctgg
gccggcagcgcgccccgccgcctcggcgccgatgcgattagcgaccctgcctccgcggcg
ctcgcaagctctatccccgaccggatcaagaatgacgatcccgccggcgccgaagcgttg
ctcaacgccgccgccgaccggctctcacccgaagcgcgcgacgagtggcggcaaaaggtc
gcctggtcctattatatcgagaatgacgacgccaacgcgcttcgcctcgccagtgagtgc
agcaatggccacggcgcctggtcgacgcagggcgcgtgggtcaaggggctcgcttcgtgg
cgcacgcgcgattaccgcaccgcgctcatcgctttcgaccgcgtagccaaggaagcgccc
gatagcgaacagcgcgccgcggcctattactggtcggcgcgcgccgcgatcgccgcgggc
gagcccgcatcggtgcaacagcgcctgcgcgccgccgccgcgaatgaggaaaccttctac
ggcctgctcgccgccgaaacgctcggtgtcgagccgaaccgccagcgcgagaatgtccgc
gccgaccgcagcgcatggcgcgctttggaggacctgcccaacgtccgcgccgcgatggcg
ctggccgaaatcggcgaggataaatatgccgacgcagcgctccgccatcaggcgcggatc
ggcgatatgcgccagcatgaacaattgctcgcgatcgcgggcgtgttgaatctgcccgaa
acgcagctttacctcgcacacaatacgccgcagggccgcaaaccttcggcgcaggcgcgc
tatccgcaacccaaatgggagcccaatggcgggtggaaggtcgatcctgcgctggttttt
gcccacacgctgcaggaatcgcgattccagcgcagcgtcgtcagccccgcgggcgcgttc
ggtctgatgcaggtgcgtccgggcaccgcgcgtgacgttgcgcgctggcgcggcgatctc
gggaccggtgatctccgcatccccgcggtcaacatggatatggggcagagctatctgcaa
tatctcagcaaggatccctcgaccggcgggctgctgcccaaggtgatcgcggcctataac
gccgggcctgcgcccgtcgcacgctggcagtccgaaatccgcgataatggcgatcctttg
ctctacatggaatcgatcccctattgggaaacgcgcgggtatgtcggcatcgtgctgcgc
aattactggatgtatgaggcgcaacagggcaagccgtcggtcagccgcgccgcattggcg
cagggcaaatggccgcgcttccccgatggcaaggaccgcacgcgcctgagctatgccggc
gacctgtcgaatgccgattga
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