Sphingopyxis fribergensis: SKP52_09280
Help
Entry
SKP52_09280 CDS
T03542
Symbol
ccsA
Name
(GenBank) Citrate synthase, chromosomal
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00020
Citrate cycle (TCA cycle)
sphk00630
Glyoxylate and dicarboxylate metabolism
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
sphk01210
2-Oxocarboxylic acid metabolism
sphk01230
Biosynthesis of amino acids
Module
sphk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphk_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sphk_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SKP52_09280 (ccsA)
00630 Glyoxylate and dicarboxylate metabolism
SKP52_09280 (ccsA)
Enzymes [BR:
sphk01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
SKP52_09280 (ccsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
AJA08767
UniProt:
A0A0A7PLH8
LinkDB
All DBs
Position
1962242..1963525
Genome browser
AA seq
427 aa
AA seq
DB search
MTDTAKITLGDKTVDSPVLSGTVGPDVVDIRKFYAQTGAFTYDPGFTSTASCESQLTYID
GDEGVLLHRGYAIGDLAEQSSFMETCYLLLNGELPNGEELQTFENTITRHTMLHEQLATF
YRGFRRDAHPMAVMCGVVGALSAFYPDSTEIHDPHQRMIASHRLIAKMPTIAAMAYKYSV
GQPFVYPDNSLSYTGNFLRMTFGVPAEPYEVNPVVERALDRIFILHADHEQNASTSTVRL
AGSSGANPFACIAAGIACLWGPAHGGANEAALNMLREIGRPERIPEYIARAKDKDDPFRL
MGFGHRVYKNYDPRATVMQKTVREVFEALKVNDPVFEVALQLEEMALSDPYFVEKKLFPN
VDFYSGVILSAIGFPTTMFTALFALARTVGWVAQWNEMISDPAQKIGRPRQLYTGPTHRP
YVAVDKR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactgcgaaaatcaccctcggcgacaagaccgtcgatagccctgtcctgtcg
ggcaccgtcggccccgacgtcgtcgacatccgcaaattctacgcccaaacgggcgccttc
acctatgatcccggcttcacctcgaccgcgagctgcgaatcgcagctcacctatatcgac
ggtgacgagggcgtgctgctccaccgtggctacgcgatcggcgacctcgccgaacaatcg
agcttcatggaaacttgctatctcctgctcaacggcgaactgccgaacggcgaggaactg
cagacgttcgaaaatacgatcacgcgccacacgatgctgcacgaacagctcgcgaccttc
tatcgcggcttccggcgcgacgcgcacccgatggcggtgatgtgcggcgtcgtcggtgca
ttgagcgccttctaccccgactcgaccgagatccacgatccgcaccagcggatgatcgcc
agccaccggctgattgcgaaaatgccgacgatcgcggcgatggcgtataaatattcggtc
ggccagcccttcgtctatcccgacaattcgctgagctacaccggcaatttcctgcgtatg
accttcggcgtgcctgccgaaccctatgaggtgaacccggtcgtcgaacgcgcgctcgac
cgcatcttcatcctccacgccgatcacgaacagaatgcatcgacctcgaccgtccgcctc
gcgggttcgtcgggtgccaatccgttcgcttgcatcgccgcgggcatcgcctgcctgtgg
ggccccgcgcatggcggcgcgaacgaggccgccctcaatatgctgcgcgaaatcggccgt
ccggagcgcatccccgaatatatcgcgcgtgcgaaggacaaggacgatcccttccgcctg
atgggcttcggtcatcgcgtctacaagaattacgatccgcgcgcgacggtgatgcaaaag
accgtgcgcgaggtgttcgaggcgctcaaggtcaacgacccggtgttcgaggtcgcgctg
cagctcgaggaaatggcgctcagcgatccctatttcgtcgaaaagaagctgtttccgaac
gtcgatttctattcgggcgtgatcctgtcggcgatcggtttcccgacgacgatgttcacc
gcactcttcgcgcttgcccgcaccgtcggctgggtcgcgcagtggaacgaaatgatttcg
gaccccgcacagaaaatcggccgtccgcgccagctctacacgggcccgacgcaccgcccc
tatgtcgcggtcgacaagcgctaa
DBGET
integrated database retrieval system