Sphingopyxis fribergensis: SKP52_09300
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Entry
SKP52_09300 CDS
T03542
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphk03032
]
SKP52_09300 (gyrA)
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_09300 (gyrA)
Enzymes [BR:
sphk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SKP52_09300 (gyrA)
DNA replication proteins [BR:
sphk03032
]
Prokaryotic type
DNA Topoisomerases
SKP52_09300 (gyrA)
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SKP52_09300 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJA08771
UniProt:
A0A0A7PF92
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All DBs
Position
1967352..1970084
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AA seq
910 aa
AA seq
DB search
MTEENTPTPPSEDGVSSINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSAF
ESGYVAGRPYRKSARIVGDVMGKYHPHGDSSIYEALARMTQDWSMSVPLVDGQGNFGSMD
PDPPAAMRYTESRLAKVANTLLGDLDKDTVDFQPNYDGSESEPTVLPARYPNLLVNGAGG
IAVGMATNIPPHNLGEVINATLATIDNPEISLDDLMTIIPGPDFPTGAMMLGQGGARLAY
ATGRGSIMMRSTYVIEEGRNDRQSIVLTAIPFQVGKSGLVEKIAEAARDKRIEGVADIRD
ESNREGVRVVIELKRDATAEVVLNQLWRHTPAQSSFPANMLAIRGGRPEMMGLKTILEAF
IAFREEVITRRCKFELAKARDRAHILLGLVVAVSNLDEVVRIIRGSSSPAAARDALLARE
WPIGDIAPYIRLVEAIDGEMDESSSYRLSEIQVKAILDLRLHRLTALGRDDIGNELKELA
SEIEGLLEILADREKLYVVMREELIAVRDEFAKPRRTVLAPAADGIDDEDLIEREEMVVT
VTLDGYIKRTPLETFRAQRRGGKGRAGMATKDEDVVTNLFVTSTHTPVLFFSTLGKVYRM
KVWRLPEGGPATRGRPMINLLPLGPGETISTVLPLPEDEAEWGKLHVMFATAKGNVRRNS
MDAFTNVPSNGKIAMKFEGEDEDDRLIGVALLDESDDVLLATRQGKAIRFAGDDVREFQS
RNSTGVRGMRLAGGDEVISLSILHRVGTTMEEREAYLRAAPWKDNENAPTLDGDRMAELA
ASEQFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIARNGPVVASFPATKIHQLMLV
TDQAKLIRMGLDSMRVIGRGSAGVRLFDVAKDEHVVSAALIEESDEEDVDGIEGEAPSPE
AAPTAETPSE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaagaaaatacgcctacgccgccgtccgaggatggcgtttcatcgatcaatatc
gtcgatgaaatgaaaacatcgtacctcgattacgcgatgagcgtgatcgtcagccgcgcg
ctccccgacgtccgcgacgggttgaagccggtgcaccgccgcatcctctactcggcgttc
gaaagcggctatgtcgccgggcgtccctatcgcaagtcggcgcgtatcgtcggcgacgtc
atgggtaaatatcacccgcacggcgacagctcgatctacgaagcgctcgcgcgcatgacg
caggactggtcgatgagcgtcccgctcgtcgacggtcagggcaatttcggctcgatggac
cccgatccgccggcggcgatgcgctacaccgaatcgcgcctcgccaaggtcgcgaacacg
ctgctcggcgatctcgacaaggacaccgtcgatttccagccgaactatgacggctcggaa
tccgaaccgaccgttcttcccgcgcgctaccccaatttgctcgtcaacggcgcgggtggg
atcgcggtcggcatggcgaccaatattccgccgcataaccttggcgaagtgatcaacgcg
acgctggcgacgatcgacaatcccgaaatcagcctcgacgacctgatgacgatcattccc
ggccccgatttcccgaccggcgcgatgatgctgggccagggcggcgcgcgcctcgcttac
gccaccggccgcggctcgatcatgatgcgctcgacctatgtcatcgaggaagggcgtaac
gatcgccagtcgatcgtcctcaccgccatccccttccaggtcggcaagtccggcctcgtc
gagaagatcgccgaggccgcgcgcgacaagcggatcgaaggcgtcgccgatatccgcgac
gaatcgaaccgtgagggcgtccgcgtcgtcatcgaattgaagcgcgacgcgaccgccgag
gtcgtgctcaaccagctatggcggcacacccccgcgcagtcgagcttccccgccaacatg
ctcgcgatccgcggcggacgccccgaaatgatggggctgaagacgatcctcgaggcgttc
atcgccttccgcgaggaagtcatcacccgccgctgcaagttcgaactcgcgaaagcgcgc
gaccgggcgcacatcttgctcggtctcgtcgtcgcggtcagcaatctcgacgaagttgtc
cgcatcatccgcggatcgtcgagccccgccgcagcgcgcgacgcgctgctggcgcgcgaa
tggccgatcggtgatatcgcgccctatatccgtctcgtcgaagccatcgatggcgagatg
gacgaaagttcgagctatcgcctgtccgaaatccaggtgaaggcgatcctcgaccttcgc
ctgcatcgcctgacggcgcttggtcgcgacgatatcggtaacgaactcaaagagctggca
agcgagattgagggcctgcttgaaatcctcgccgaccgcgaaaaactctatgtcgtgatg
cgcgaagagctgatcgcggtgcgcgacgaattcgccaagccgcgccggactgtgcttgcc
cccgccgccgacggtatcgacgacgaggatctgatcgagcgcgaggagatggtcgtcacc
gtcaccctcgacggctatatcaagcgcaccccgctcgagacgttccgcgcgcagcgccgc
ggcggcaagggccgcgcgggcatggcgacgaaggacgaggatgtcgtcacaaatttgttc
gtcacctcgacgcacacgccggtgctcttcttctcgacccttggcaaagtctaccgcatg
aaagtatggcgcctgcccgagggcgggcccgcaacgcgcggccgtccgatgatcaatctg
ctgccgcttgggcccggtgagacgatctcgaccgtgctgccgctgcccgaggacgaggcc
gaatggggcaagctgcacgtcatgttcgcaaccgcgaagggcaatgtgcgtcgcaacagc
atggacgccttcaccaacgtgccgtcgaacggcaagatcgcaatgaaattcgagggcgag
gacgaggacgaccggctgatcggcgtcgcattgctcgacgaaagcgacgatgtcctgctc
gcgacgcgccagggtaaggcgatccgctttgccggcgacgatgtccgcgaattccagagc
cgcaattcgaccggcgtgcgcggcatgcggctggcaggcggcgacgaggtcatctcgctc
tcgatcctccaccgcgtcggcacaacgatggaggaacgcgaagcctatctgcgcgccgcg
ccgtggaaggataatgagaatgcgccgaccctcgacggcgatcgcatggccgaattggcg
gcgagcgagcagttcatcctgaccgtttgcgccaatggctatggcaagctgtcgtcggcc
tatgaatatcgccgcaccggtcgcggcggccaggggatcaccaacatcgacaatatcgcg
cgcaacggcccggtcgtcgcgagcttccccgccacgaagatacatcagctgatgctggtg
accgatcaggcaaagctgatccggatgggcctcgattcgatgcgcgtcatcggccgcggc
tcggcgggcgtgcgcctattcgacgtcgccaaggacgaacatgtcgtctcggcggcgctg
atcgaggaaagcgacgaggaagacgtcgacggcatcgaaggcgaagcgccctcgcccgaa
gccgcgccgacggcggaaacgccctccgaatga
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