Sphingopyxis fribergensis: SKP52_10150
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Entry
SKP52_10150 CDS
T03542
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03420
Nucleotide excision repair
sphk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SKP52_10150
03430 Mismatch repair
SKP52_10150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_10150
Enzymes [BR:
sphk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SKP52_10150
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SKP52_10150
MMR (mismatch excision repair)
Other MMR factors
SKP52_10150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJA08937
UniProt:
A0A0A7PLX0
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All DBs
Position
2145480..2147804
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AA seq
774 aa
AA seq
DB search
MNDTPASLPDLSSPNPSDPPYLQGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAH
IMATRRAWPSEILAVTFTNKAAREMRERIGRMVGDVVEGMPWLGTFHSIAAKMLRRHAEL
VGLQSNFTILDTDDQLRVLKQLIQAEGLDEKRWPARQLAGLIDKWKNRGLVPADLDAADK
EAYADGKGQHFYALYQARLKTLNACDFGDLLLHMLVILKTHRDVLEQYQERFKYILVDEY
QDTNASQYLWLRLLAQQRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQN
YRSTPQILAAASALIAQNSGRLGKTLWTDLEPGDKLRVVGVWDGPEEARRIGEELESLQR
RRVSLERAAILVRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRLVQSPA
DDLAFERIINTPKRGLGDKALARIHQFARHERTPLLHAASRITETDELTPQARRQLANFI
AQMRSWQTKANELSHPELTQLILDESGYTAMLQADRSIEAAGRLENLSELVRAMEEYESL
EAFLEHVSLVMDRDNNDTTETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRSMDEGGTQ
SLEEERRLAYVAITRARQRASIYHAANRRIYGQWVSSIPSRFIAEIPPEHVDSENSFGGG
QSLWRANWSAQGDPFAHVAANAAGRQPARTMTRGPAWQRATAQSSTITRAPAPSERGPAA
SVGAKARSDLAIGMRVFHEKFGYGDIADIDGNKLEVEFEQAGSKRVLDSFVKLA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatacccccgcctccctgcccgacctgtcctcgccgaacccctcggacccacct
tatctgcaagggctcaacggcccgcagcggcaggccgtgcttaccaccgagggcccggtg
ctgatgctcgcgggtgccggaaccggcaagaccgcggcgctgaccgcgcgcctcgcacat
atcatggcgacgcgccgcgcctggccgtccgaaatcctcgcggtgaccttcaccaacaag
gcggcgcgcgagatgcgcgagcgcatcgggcggatggtcggcgacgtggtcgagggcatg
ccatggctcggcaccttccacagcatcgcggcgaagatgctgcgccgtcacgccgaactg
gtaggcttgcaaagcaatttcaccatcctcgacaccgacgaccagctccgcgttctcaaa
cagctgatccaggctgaggggctcgacgagaaacgctggcccgcccgccagctcgcgggt
ctgatcgacaaatggaagaaccgcgggctcgtccccgccgacctagacgccgccgacaag
gaagcctacgccgacggcaagggccagcatttctacgcgctgtatcaggcgcggctgaag
acgctcaacgcctgcgatttcggcgacctgctgctccacatgcttgtgatcctcaagacg
caccgtgacgtgctcgaacaatatcaggaacgcttcaaatatatcctcgtcgacgaatat
caggacaccaacgccagccaatatctctggctccgcctgctcgcacagcagcgaaagaac
atctgctgcgtcggcgacgatgaccagtcgatctattcgtggcgcggcgccgaggtcgcg
aacatattgcgcttcgaaaaggatttccccggcgcgaccgtgatccgcctcgaacagaat
taccgctcgacgccgcagattctcgccgccgcctcggcgctgatcgcgcagaactcgggt
cgcctgggcaagacactgtggaccgacctcgaacccggcgacaagctgcgcgtggtcggg
gtgtgggacgggcccgaggaagcgcggcggatcggcgaagaactcgaaagcctccagcgc
cggcgcgtatccctcgaacgcgccgcgatcctcgtccgcgcccagttccaaacgcgcgag
ttcgaagaccgctttatcgcgatcggcatgccgtaccgcatcgttgggggtttccgcttc
tacgaacgcgccgaaatccgcgacgcgctcgcctatctgcgcctcgtccagtcgcccgcc
gacgatctcgccttcgaacgcatcatcaacacccccaagcgcggactcggcgacaaggcg
ctcgcgcgtatccatcagttcgcgcgtcacgagcgcacgccgcttctccatgccgcgtcg
cgcatcaccgaaaccgacgagctgaccccgcaggcgcgccgccagctcgcaaacttcatc
gcccagatgcgcagttggcagaccaaggccaacgaactttcgcaccccgagttgacacag
ctcattctcgacgaatcgggctatacagcaatgctgcaggccgaccgcagcatcgaagcc
gcaggccggctcgaaaacctctccgaacttgtccgcgcgatggaggaatatgaatcgctc
gaggcgttccttgagcatgtcagcctcgtcatggaccgcgacaacaacgacacgaccgag
acggtgacgatcatgacgatccacgccgccaaaggcctcgaattcgaccacgtcttcctc
gccggatgggaagatggcgtcttcccgtcgcagcgctcgatggacgaaggcggcacgcag
agcctagaggaagaacgccgcctcgcctatgtcgcgatcacgcgcgcgcggcagcgtgca
agcatctatcacgccgcgaaccgccgcatttatggccagtgggtgagcagcatccccagc
cgcttcatcgccgaaatcccgcccgagcatgtcgacagcgagaacagcttcggcggtgga
cagagcctgtggcgcgcgaactggtctgcgcaaggcgatcccttcgcgcatgtcgccgcc
aatgctgctgggcgccagcccgcgcgcacgatgacgcgcggcccggcgtggcaacgggca
acggcgcaatcgtcgacgatcacccgcgccccggcgccttctgaacgcggcccagcggcc
tccgtgggcgcgaaggcacgctccgatctcgcgatcggaatgcgcgtcttccacgagaaa
ttcggctatggcgacattgccgacatcgacggcaacaagcttgaagtcgagttcgaacag
gccggcagcaagagggtgctcgacagcttcgtcaagctcgcctga
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