Sphingopyxis fribergensis: SKP52_10455
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Entry
SKP52_10455 CDS
T03542
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_10455
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_10455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AJA08996
UniProt:
A0A0A7PFV7
LinkDB
All DBs
Position
complement(2204850..2209088)
Genome browser
AA seq
1412 aa
AA seq
DB search
MAEPDAFAAEDAAPVKASRAWPLTLLRWIGLSLLGLMLLFALFLVGLNSDAGRRFVVTQI
EKYEFENGMKIGIGRLDGSLYGQMIIRNFTLSDPKGVFLASPEVRVDWRPIRYLANHVDV
RSATAATMTMRKLPEFKVVPDTGEPLLPDLDIDVGLVRVDRFIVEPPVAGERQVARLNGK
IAIADRRAQVTANAETIAGGGGRGDALKIVLDAVPEANRLSVNLDISAPEGGVLAAMGGF
KETLTAKLNGRGDWKAWDGNLTANLGTAPLARVALTGRDGTFSAKGAAQASRLFADGPVA
EILGTETAIDLTARLNERKAAIDGRLSSDAAQLGISGGIDLGASRYEGLQLAVNILRPGA
IAPAIRANGLRATATLDGAFAQPTVEYQANANSLAFNDIIVEGLALAGKARVDADQIVIP
VAGKATRIRGLDTVAGGTLVVVRLDGDLAYSNGRILSDNLRLRSPRIDAKAIIIADLTKG
FYTGAIDGRINDYRIESVGIFDIDTDADLKTAPRGGFEIVGRVRARSTKLFNSGVRDFLG
GNATASSDVRYGTDGMIRFANLRMSAPRLRITGGQGSYAPNGQIKLTARANSTDYGPVGV
QLAGTISDPRAVVTAARPGLGIGLANLVAKINGAPNGYRLAATGDTDYGPLSADVVLLMA
TGPLTIDVERGDLSGIGFNGRLVKSDAGPFVGQLNASGQGLGGLVRLTAAGQYQAAAINV
RANDVVLPGPAKLAVGSAVVDADITLYDTPHIVADIQIADTQIRDYDIAVGRVKVDYRGG
SGKAQALVEGTSGVPFRIAANADLQPKLWRAAVQGRATGINFRTTTPARIIPGADGYELL
PTNISLGRGSSARVAGRFGDGIMVQSRLERVNMAILNAVYPDMGLGGRATGSFDFEQANS
DSFPRADARLTITDFTRTTAASVSQPVDVNFAGKLLADGGEARAVMRKRGSVIGRVQASL
RPLGAGAGTWTERLMAAPLGGGIRYNGPADTLYSFFGPATQHVSGPVAVAADFSCSVADP
CLQGVVRGKDMVYENQTYGTRLTKMVVNGRFTGNRLEIEQLTATAGEGTVQAKGYISLAS
ADGYPMNISATLDNARLAKSENIAARATGNLTLEKVAGQTALLSGSLRLPETRYRIIREG
AAQVPVLTGVRRKPPAGRQRISGDGLAAVGGSLFDLIRLDIALKAPDEIYVSGMGLESEW
KADIVLRGTTQDPRVTGEIELVRGTLGFAGRSFELQEGRVTFPTGEAFDPAIRLLASDTI
ETVTVSISVTGRASNPQIAFSSVPGLPQDEIVSRILFGDSITTLSPLQAVQLASSLNTLS
GTGGGLSPLGSLQSATGIDRLRVLGPDDTVGRGAALAAGQYITKDIYLEVITDARGYTAT
QLEISLTPALSLLSQAGGSGGSNLSVRYRKDY
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccgacgccttcgccgcggaggacgctgcgcccgttaaagcgtcgcgcgcg
tggccgctgacgctattgcggtggatcgggctgagcctgcttgggctgatgctgcttttt
gcgctgttccttgtcgggctcaacagcgacgcggggcgtcgcttcgtcgtcacccagatc
gagaaatatgaattcgagaacgggatgaagatcggcatcggacggctcgacgggtcgctc
tatggccagatgatcatccgcaatttcactttgtccgatcccaagggggtatttctcgcc
tcgcctgaggtcagggtcgattggcggccgatccgttatctcgcgaaccatgtcgacgtc
cgctcggcgaccgccgcgacgatgacgatgcggaaattgcctgagtttaaggtcgttccc
gacaccggcgagccgctgcttcccgatctcgatatcgacgtcgggttggtgcgcgtcgac
cgtttcatcgtcgaaccgccggttgcgggcgagcgccaggttgcaaggctgaacggcaag
atcgcgatcgccgaccgccgtgcgcaggtcactgcgaatgccgagacgatcgcgggcggc
ggcgggcggggcgacgcgctgaagatcgtgctcgatgccgtgcccgaggcaaaccggctc
tcggtcaatctcgatatctcggctcccgagggcggggtgctcgccgcgatgggcgggttc
aaggagacgctgacggccaagctcaacggacgcggcgactggaaggcctgggatggcaat
ctgaccgcaaacctcggcaccgcgccgctagcccgcgttgcgctgacggggcgagacggg
acgtttagcgccaagggggcggcgcaggcttcgcggctgttcgccgatggcccggtagcc
gagattttgggcaccgaaaccgcgatcgacctcaccgcgcgattgaacgagcgcaaggcg
gccatcgacggccggctctcgtcggatgccgcccagctcgggatcagcggcgggatcgat
cttggcgccagtcgctacgaggggctgcaactcgcggtcaatatcttgcggccgggcgcg
atcgcgcccgccatacgcgccaatgggctccgcgcgacggcgacgctcgatggcgctttc
gcgcagccaacggtcgaatatcaggcgaacgccaacagcctcgcgttcaacgatatcatc
gtcgagggtctggccctcgcgggcaaagcgcgcgtcgatgccgatcagatcgtcattcct
gtcgcgggcaaggccacgcgcattcgcgggctcgatacggtcgctggcggcaccttggta
gtggtgcggctcgacggcgaccttgcctacagcaacggccgtatcctcagcgataatctg
cgcctccgctcaccgcgcatcgatgccaaagcgatcatcatcgccgatctcaccaaaggt
ttctacaccggcgcgatcgacggacggatcaacgattatcgtatcgaaagcgtcggcatt
ttcgacatcgacaccgatgccgaccttaaaaccgcgccgcgcggcgggttcgagatcgtc
ggccgcgtccgtgcacgttcgaccaagctgttcaattcgggcgtgcgcgatttcctcggc
ggcaatgcgacggcatcgagcgacgtgcgctatggcaccgatggcatgatccgctttgcc
aacctgcgcatgtcggcaccgcgactgcgcatcacaggcgggcagggcagctatgcgccg
aacgggcagatcaagctgaccgcgcgtgccaattcgaccgattatggccctgtcggtgtc
cagcttgccgggacgatcagcgacccgcgcgcggtggtgaccgccgcgcggccggggctt
ggcatcgggctcgccaatctggtggcgaagatcaacggcgcgccgaacggctatcgcctc
gcggcaacaggcgataccgattatggcccgctgtccgccgacgtcgtgttgctgatggcg
acggggccgctgacgatcgatgtcgagcgtggggacctgtcgggcatcggcttcaacgga
cgattggtgaagagcgacgccgggcctttcgtcggtcagctcaacgcgtcggggcagggg
ctgggcgggcttgttcggctgactgcggcggggcaatatcaggctgccgcgatcaacgtc
cgcgcgaacgacgtcgtgctccccggaccggcgaaactggcggttggctcggcagtcgtc
gatgccgacatcacgctttacgacacgccgcatatcgtcgccgacatccagatcgccgac
acgcagattcgcgactacgacatcgcggtcggacgcgtgaaggtcgactatcggggcggc
agcggcaaggcgcaggcacttgtcgagggcaccagcggcgtgccgttccgtatcgccgcg
aatgctgacctccagcccaaactctggcgcgcggcggtgcaagggcgtgcgacagggatc
aactttcgcacgacaacgcccgcgcgcatcattcccggtgccgacggttacgaattgctg
ccgaccaatatcagcctcggccgcggcagcagcgcgcgcgttgccggacggttcggcgac
ggcatcatggtccagagccggctcgagcgcgtgaacatggcgatcctcaacgccgtctat
cccgacatgggccttggcggccgtgcaacgggcagtttcgatttcgagcaggccaattcg
gacagcttcccgcgcgccgacgcgcggctgacgatcaccgacttcacgcgcaccaccgca
gcgtcggtcagccagccggtcgacgtcaattttgccggaaaactgcttgccgacggcggc
gaagcccgcgcggtgatgcgcaagcgcggcagcgtgatcgggcgcgtgcaagcctcgctg
cgcccgctgggcgccggtgccggcacatggaccgaacggttgatggccgcgccgcttggc
ggcggcatccgctacaatggtcccgccgacacgctctattccttctttggcccagccacc
cagcatgtctcggggccggtcgcggtcgccgccgatttcagctgcagcgtcgccgatccg
tgcctgcagggcgtcgtgcgcggcaaggatatggtgtacgaaaaccagacctatggcacg
cggctgaccaagatggtcgtcaacggccgcttcacaggcaaccgcctggagatcgagcaa
ctgaccgccaccgccggtgagggcacggtccaggcgaaaggctatatcagccttgcgtcg
gccgacggttatccgatgaatatttcggcgacgctcgacaatgcgcgcctcgccaagagc
gaaaatatagccgcgcgcgcgaccggcaacctgacgctcgaaaaggtggcgggacagact
gctctgttgtctggcagcctgcgccttcccgaaacgcgctatcgcatcatccgcgaaggc
gccgcgcaggttccggtgctgaccggggtgcggcgcaagccgcccgcgggacgccagcgg
atcagcggcgacgggcttgcggcggtcggcggcagcctgtttgacctcatccgcctcgat
atcgcgctgaaggcgccggacgaaatctatgtcagcggcatggggcttgaatccgaatgg
aaggccgacatcgttctgcgcggcacgacgcaggatccccgcgtcacgggcgaaatcgag
ctggtgcgcggaacgctcggcttcgccggtcggtcgttcgaacttcaggagggcagggta
accttcccgacgggcgaagccttcgaccccgcgatccgcctgctcgcgagcgatacgatc
gaaaccgtgacggtcagcatcagtgtgacaggccgtgcgagcaatccgcaaatcgctttc
tccagcgttcccggcctgccgcaggacgaaatcgtctcacgcatcctgttcggcgattcg
atcacgacgctgtcgccgttgcaggcggtgcaactcgcctcgtcgctcaacacgctcagc
ggcaccggcggcggattgagcccccttggttcgctccagtcggcgacgggcatcgaccgg
ctgcgcgtgctcggtcccgacgataccgtcggacgcggcgcggcgctggcggctggccag
tatatcaccaaggacatctatctcgaggtgatcaccgacgcgcgcggctataccgcgacg
caactcgagatcagcctgacccccgcgctgtcactgctcagccaggcgggcggatcgggc
ggatcgaacctcagcgtccgatatcgcaaggattattga
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