Sphingopyxis fribergensis: SKP52_10510
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Entry
SKP52_10510 CDS
T03542
Symbol
rffA
Name
(GenBank) Lipopolysaccharide biosynthesis protein RffA
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00541
Biosynthesis of various nucleotide sugars
sphk01100
Metabolic pathways
sphk01250
Biosynthesis of nucleotide sugars
Module
sphk_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SKP52_10510 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphk01007
]
SKP52_10510 (rffA)
Enzymes [BR:
sphk01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
SKP52_10510 (rffA)
Amino acid related enzymes [BR:
sphk01007
]
Aminotransferase (transaminase)
Others
SKP52_10510 (rffA)
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJA09007
UniProt:
A0A0A7PM41
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Position
complement(2223553..2224677)
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AA seq
374 aa
AA seq
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MIPFNKPYLVGTENLYIGEALASRKLSGDGSFTKRAQALIEAQLGSGKSLLTTSCTDALE
AAALLCDLKPGDEVIVPSYTFVSTANAFALRGATIRFADSGADNPNIDPASVASLVNERT
RAIVPVHYAGVACDMDALQAIADGVGATIVEDAAQAIASFYKGKPLGTLGTFSAFSFHET
KNIVCGEGGALHVNDPARALDAEIVREKGTNRSAFFRGEVDKYNWVGLGSSYLPSELVAA
FLTAQLEAVDAIQARRIAVWDRYAERLAHLAQRNDISLPVIPDYATNNAHMFYLVCDVLE
TRTRLIEHLKASGVMAVFHYQALHASPYFAANNATQPLAQATRYTDCLVRLPLYADMDMD
DADRVADAVCAFFG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgatccccttcaacaaaccttatctcgtcggaaccgaaaatctctatatcggtgaagcg
cttgcgagccgcaaactgtcaggcgacggcagttttaccaagcgcgcgcaggcgttgatc
gaagcgcagcttggatcgggcaagtcgcttttgacgacgtcgtgcaccgacgcgctggag
gccgcggcgttgctctgcgatctcaaacccggggacgaggtgatcgtcccgagctacacg
ttcgtttcgaccgcgaatgcttttgcgctgcgcggtgcgacgatccgttttgccgacagc
ggagccgacaatccgaatatcgatccggcgtcggttgcctcgctggtcaatgaacggacg
cgcgcaatcgtgccggtgcattatgcgggcgttgcgtgcgatatggatgcgctgcaggcg
attgccgatggcgtcggcgcaacgatcgtcgaggatgcggcgcaggcgatcgcgtccttt
tacaaaggcaaaccgctcggaacccttgggaccttttcggccttttcctttcacgagacg
aaaaatatcgtttgcggcgaagggggggcgcttcatgtcaacgatccggcgcgtgcgctc
gacgccgaaatcgtccgtgaaaagggaaccaaccggtcggcctttttccgcggcgaagtc
gacaaatataattgggtcgggctgggttcatcctatctgccgtccgaactcgtcgcggcc
tttctgacggcgcagctcgaagcggtcgatgcgatccaggcgcggcggatcgcggtatgg
gatcgctacgccgaacggctggcgcatctcgcgcagcgcaacgatatcagccttcccgtg
attccggattatgcgaccaataatgcgcatatgttctatctggtatgcgacgtactcgaa
acgcgcacccggctgatcgagcatctgaaggcgagcggcgtgatggcggtgttccattat
caggcgctccatgcgagcccctattttgcggcgaacaacgcgacgcagccgcttgcgcag
gcgacgcgctatacggactgccttgtacgcctgccgctatacgccgacatggacatggac
gacgccgaccgggtcgccgacgcggtctgcgcctttttcggctga
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