Sphingopyxis fribergensis: SKP52_11035
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Entry
SKP52_11035 CDS
T03542
Name
(GenBank) AraC family transcriptional regulator
KO
K12243
AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_11035
Transcription factors [BR:
sphk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SKP52_11035
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
TetR_N
HTH_36
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AJA09108
UniProt:
A0A0A7PIR9
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Position
complement(2345291..2346052)
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AA seq
253 aa
AA seq
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MPSEHMSKHPVIVSPEMTTFVGRGPCDRLLLPPDALLLGFGDIGEPVVRTLTFRELESEG
HLLVFAVSRAACRRLFSDLPDADARWFLPSDLRTLGQSIVAPDCDEAAADTLRLARSIEL
LCQFFAALRAGALIPVDGQPSLTESDIARIAAARRIVDTRWHEKLTIDDIAKSCGINRDK
LTRGFRELYQCSVAEALSDRRLRQARQMLAASDLPVASIGYRCGYLNNASFTRAFSRRFG
MAPTAMRRVGVAA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgagcatatgtccaagcatccggtgatcgtgtcgcccgaaatgaccaccttt
gtcggccgtggtccatgcgaccgcctgttgctgccccccgatgcgctgctgcttggcttc
ggcgacatcggtgaacccgtcgtccgcacattgacctttcgcgaactcgagagtgaaggg
catttgctcgtcttcgccgtatcgcgcgccgcgtgccgccgcctgttcagcgacctgccc
gacgccgacgcgcgctggttcctgccgtcggacctgcgcacgctcggccagtcgatcgtc
gcgcccgattgcgacgaggcggcggcggacacgctgcgcctcgcgcgcagcatcgaactc
ctttgccaattcttcgccgcgctccgcgccggcgccctcatccctgtcgacggacagcca
agcctgaccgaaagcgacatcgcgcggatcgcggcggcgcgtcggatcgtcgacacccgt
tggcacgagaaattgacgatcgacgacattgccaaaagctgcgggatcaatcgcgacaag
ctaacgcgcgggtttcgcgagctctatcaatgcagcgttgccgaggcgctgagcgatcgg
cggctgcgtcaggcgcgacagatgcttgcggcgagcgatttgcccgtggcgagcattggc
tatcgctgcggctatctcaacaacgccagcttcacgcgcgccttttcgcgtcgcttcggc
atggcgccgaccgcgatgcggcgggtcggagtggcggcatga
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