Sphingopyxis fribergensis: SKP52_11405
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Entry
SKP52_11405 CDS
T03542
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SKP52_11405 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sphk03011
]
SKP52_11405 (rpsA)
Ribosome [BR:
sphk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SKP52_11405 (rpsA)
Bacteria
SKP52_11405 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
CvfB_2nd
SH3_16
Motif
Other DBs
NCBI-ProteinID:
AJA09179
UniProt:
A0A0A7PGV7
LinkDB
All DBs
Position
2436361..2438073
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AA seq
570 aa
AA seq
DB search
MATTAFPTRDDFAAMLDESLGGADGGFEGRVVKGTVTAIENDLAVIDIGLKSEGRVPLRE
FAMPGQKADINVGDEVEVYVDRVENANGETMLSRDRARREAAWDRLEEEFNKEARVEGVI
FGRVKGGFTVDLGGAVAFLPGSQVDIRPVRDVGPLMDLPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLILNLEEGQIIEGAVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPS
EVINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGVAAKYPVGAKLSGTVTNITDYGA
FVELEAGIEGLVHVSEMSWVKKNVHPGKIVSTSQEVDVIVLEVDSDKRRISLGLKQAQSN
PWGAFAETHPVGSVVEGEVKNATEFGLFVGLPGDVDGMVHMSDIAWGISGEEALHLHRKG
EAVQVVVLDVDVEKERISLGIKQLEKGAPAVGGGTAAAGSVKKNDVVTVTVLEVRDNGLE
VQAGDDGATGFIKRADLGRDRDEQRAERYQVGQKFDAMVIGFDRSKKPNFSVKAMQIAEE
KQAVAQYGSSDSGASLGDILGEALKAGKKD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggccactacggctttcccgacgcgcgacgatttcgccgcgatgctcgatgaatcgctt
ggtggtgccgacggcggctttgaaggccgcgtcgtcaagggcaccgtgaccgcgatcgaa
aacgacctggcagtgatcgacatcggcctgaagagcgagggccgcgtgccgcttcgcgaa
ttcgcgatgccgggccagaaggccgacatcaatgtcggcgacgaagtcgaagtctatgtc
gaccgcgtcgaaaacgccaatggcgaaaccatgctgtcgcgcgaccgtgctcgccgcgaa
gccgcctgggaccgcctggaagaagaattcaacaaggaagcccgcgtcgaaggcgtcatc
ttcggccgcgtcaagggcggcttcaccgtcgacctcggcggcgccgtggcgttccttccg
ggttcgcaggtcgacatccgccccgtgcgcgacgtcggcccgctgatggacctgccgcag
cccttccagatcctcaagatggatcgtcgccgcggcaatatcgtcgtgtcgcgccgcgcc
atcctcgaagaaacgcgcgccgaacagcgctcgggcctgatcctgaacctcgaagaaggc
cagatcatcgaaggcgcggtcaagaacatcaccgattatggtgcgttcgttgatctcggc
ggcatcgacggcctgctccatgtcaccgacatgagctacaagcgcgtcaaccacccgagc
gaagtcatcaacatcggtgacaccgtccgcgtccagatcatccgcatcaaccgcgacacg
cagcgcatcagcctcggcatgaagcagctcgaaagcgatccgtgggaaggcgtcgccgcc
aaataccccgtcggtgcgaagctgtcgggtacggtcacgaacatcaccgattacggtgct
ttcgtcgaactcgaagccggcatcgaaggcctggtccacgtcagcgaaatgtcgtgggtc
aagaagaacgtccaccccggcaagatcgtctcgaccagccaggaagtcgacgtcatcgtc
ctcgaagtcgacagcgacaagcgccgcatctcgctcggcctcaagcaggcccagtcgaac
ccctggggcgcgttcgccgaaacccacccggtgggctcggtcgtcgaaggcgaagtcaag
aacgcgaccgaattcggtctgttcgtcggcctgccgggcgacgtcgacggcatggttcac
atgtcggacatcgcttggggtatctcgggcgaagaagcgctgcacctccaccgcaagggc
gaggccgtgcaggtcgtcgttctcgacgtcgacgtcgagaaggaacgcatcagcctcggc
atcaagcagcttgaaaagggtgctccggccgttggcggcggcaccgctgctgctggctcg
gtgaagaagaacgacgtcgtcaccgtcaccgtcctcgaagtccgcgacaacggcctcgaa
gtccaggctggcgacgatggcgccacgggcttcatcaagcgcgccgaccttggccgcgac
cgcgacgaacagcgtgccgaacgttaccaggtcggccagaagttcgatgcgatggtcatc
ggcttcgaccgctcgaaaaagccgaacttctcggtcaaggcgatgcagatcgccgaagag
aagcaggctgtggcgcagtatggctcgtcggactcgggtgcgtcgctcggcgacatcctc
ggcgaagcgctgaaggccggcaagaaggattaa
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