Sphingopyxis fribergensis: SKP52_11845
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Entry
SKP52_11845 CDS
T03542
Name
(GenBank) HhH-GPD
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SKP52_11845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_11845
Enzymes [BR:
sphk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SKP52_11845
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SKP52_11845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJA09265
UniProt:
A0A0A7PGZ5
LinkDB
All DBs
Position
2531558..2532175
Genome browser
AA seq
205 aa
AA seq
DB search
MGLSQQQLNAGIDALAAQDSNFARALGNAGYPEPRIRAPGYATLLRTIVGQQVSVAAANS
IWNKLEAEFGEGCPAETVAAADFDTLRACGLSGQKQGYAKSLAQLILDGELKFDALPADD
EEAIAVLTKVKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQEAVGRILQLGARPSEKLARE
LAEAWRPHRGAAAIFSWHCYNMDVI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcagccagcagcagctgaacgcgggaatcgacgccctcgcagcgcaggatagc
aatttcgcgcgcgcgctcggcaacgccggctatcccgaaccccgcatccgcgcgccgggt
tacgccacgctgctccgcacgatcgtcggccagcaggtcagcgtcgcggccgccaattcg
atctggaacaagctggaggctgagttcggtgagggctgccccgccgagacggtcgccgcc
gccgacttcgacacgctccgcgcctgcggcctgtcggggcagaaacagggctatgccaag
agcctcgcgcagctgatcctcgacggcgaactcaaattcgatgccctccccgccgacgac
gaggaagcgattgccgtgctcaccaaggtcaagggcatcggccgctggtccgccgaaatc
tacctgctgttcgccgagggccgccccgacatctggcccgccggcgacctcgcggtgcag
gaagccgtcggccgcatcctccagctcggcgcgcggccgagcgaaaagctggcccgcgag
cttgccgaagcgtggcgaccgcatcgcggtgccgcagcgatcttcagctggcattgttat
aatatggatgtgatttga
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