Sphingopyxis fribergensis: SKP52_12005
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Entry
SKP52_12005 CDS
T03542
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00970
Aminoacyl-tRNA biosynthesis
sphk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SKP52_12005 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sphk03029
]
SKP52_12005 (gatB)
Enzymes [BR:
sphk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
SKP52_12005 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
SKP52_12005 (gatB)
Mitochondrial biogenesis [BR:
sphk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SKP52_12005 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7224
Motif
Other DBs
NCBI-ProteinID:
AJA09296
UniProt:
A0A0A7PGR3
LinkDB
All DBs
Position
complement(2565957..2567429)
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AA seq
490 aa
AA seq
DB search
MSVSDYRIKGETGEWEVVIGLEVHAQITTNAKLFSGAATAFGAEPNTQVSLVDAAMPGML
PVPNRECIRQAVRTGMAIEAQINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGAITVE
ADEKAGIPAPKVIGVERIHVEQDAGKLMHDQHPTMSYVDLNRSGVALMEIVSKPDMRSPA
EAGAYVRKLRAILRYVGSCDGNMEEGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMA
VIEGEAKRQVELIESGGTVVQETRLYDPDRGETRSMRSKEDAHDYRYFPDPDLLPLELDD
AFLAECRDSLPELPDAKRARYLAAGISAYNADVLTAEVEAARWFDTLLDAGAKPVAAANW
VTSELFGALNRMGRDISDSPVSPEHAAELLSLVADGTISGTIAKAVFEKMLESGDGAAEI
VERDGLKQTSDTGAIEAEIAKILAANADKVEQYRGGKEALFGFFVGQTMKAMQGKANPQV
VNELLKKALG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttcagattatcgcatcaagggcgaaaccggcgagtgggaggtcgtgattggc
ctggaggttcacgcccagatcacgaccaacgccaagctgttctcgggcgccgcgacggcg
tttggcgccgagccgaacacgcaggtgtcgctggtcgacgccgcgatgccggggatgctg
ccggtgccgaaccgcgagtgcatccgtcaggcggtgcgcaccggcatggcgatcgaggcg
cagatcaacaaatggtcgcggttcgaccgcaagaattatttctatgccgacctgccgcag
ggttaccagatctcgcagctttatcatccgcttgtcggagaaggtgcgatcaccgtcgag
gcggacgagaaggcggggattcccgcgcccaaggtgatcggggtcgagcgcatccatgtc
gaacaggatgccggcaagctgatgcacgaccagcatccgacgatgtcttacgtcgacctc
aaccgcagcggcgtcgctttgatggagatcgtgtcgaaacccgacatgcgctcgcccgcc
gaggctggcgcttatgtgcgcaagctgcgcgcgatcctgcgctatgttggatcgtgcgac
ggcaatatggaagagggatcgatgcgcgccgacgtcaacgtgtcggttcgcaagcccggc
gacgaattcgggacgcgcaccgagacgaagaacgtcaattcggtgcgcttcgtgatggcg
gtgatcgagggcgaggcgaagcgccaggtcgaactgatcgaaagcggcggcactgtggtg
caggaaacgcggctttacgatcccgaccggggcgagacgcgctcgatgcggtcgaaggaa
gacgcgcatgattaccgctacttccctgatcccgacctgttgccgctcgagcttgacgat
gcgtttctggccgagtgccgcgacagcttgcccgaattgcccgacgccaagcgtgcgcgt
tatctggcggcgggaatttcggcctataatgccgatgtgctgactgccgaggtcgaggcg
gcgcgctggttcgatacgttgctcgatgcgggcgcgaagcccgttgccgcggcgaactgg
gtgacgagcgagctgttcggcgcgctcaaccgcatgggccgcgacatttcggactcgccg
gtttcgcccgagcatgccgccgaattgctcagcctcgtcgcagacggcacgatttcggga
acgatcgcgaaggcggtgttcgagaagatgctcgaaagcggcgacggcgctgccgaaatc
gttgagcgcgacggtctgaagcagaccagtgacaccggagcgatcgaagccgaaatcgcc
aagatcctggccgccaatgccgacaaggtcgagcagtataggggcggcaaggaagccttg
ttcggcttcttcgtcggacagacgatgaaggcgatgcagggcaaggcgaacccgcaggtc
gtcaacgagctgctgaaaaaggcgctcggctga
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