Sphingopyxis fribergensis: SKP52_12550
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Entry
SKP52_12550 CDS
T03542
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphk03021
]
SKP52_12550 (rpoH)
Transcription machinery [BR:
sphk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SKP52_12550 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AJA09401
UniProt:
A0A0A7PGZ9
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All DBs
Position
2672154..2673056
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AA seq
300 aa
AA seq
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MANKSNVPATVPALGGEASLNRYLAEIRKFPLLTPEQEYMLAKRFQEHGDNEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFDPERGFRLATYAMWWIRASIQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKNNLAAFEDGDLSPENLTKIATDLGVTEEEVISM
NRRMSMGGDTSLNVPMGEDGDSQWQDLLGDEGPLQDERVAEAQERDVRHSLLNEALESLN
ERERHILTERRLTDDPKTLEDLSQVYDVSRERVRQIEVRAFEKLQKAMLKLAGDRRLVGA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaagcaatgttccggccacggttccagcgctcggcggtgaggcgagcctg
aaccgctatctggccgaaatccgcaaattccccctgctcacccccgagcaggaatatatg
ctcgcgaagcgattccaggagcatggcgacaatgaggctgcggcgcagctcgtcacttcg
cacctccgcctcgtcgcgaaaatcgcgatgggttaccgcggctatggcttgccggtcagc
gagctgatcagcgaaggcaatatcggcctgatgcagggcgtgaaaaaattcgaccctgaa
cgcggcttccgcctcgcgacctatgcaatgtggtggatccgcgcctctatccaggaattc
atcctgcgctcttggagcctcgtcaaaatgggcaccactgcagcgcagaagaagctgttc
ttcaacctccgccggatgaagaacaacctggcggctttcgaagacggcgacctgtcgccc
gaaaatctgaccaagatcgcgaccgacctgggcgtcaccgaagaagaagtcatcagcatg
aaccgtcgcatgtcgatgggcggcgacacttcgctgaacgtgccgatgggcgaggatggc
gacagccagtggcaggatctgctcggcgacgagggcccgctgcaggacgaacgcgtcgcc
gaagcgcaggagcgcgacgtgcgccattccctgctcaatgaggcgctcgaatcgctcaac
gagcgcgaacgccacatcctgaccgaacgtcgcctgaccgacgatcccaagacgctcgaa
gacctgagccaggtttacgacgtcagccgcgaacgcgtccgccagatcgaagtgcgcgcg
tttgaaaagctgcaaaaggcgatgctgaagctggcgggcgaccggcggttggtcggggcc
tga
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