Sphingopyxis fribergensis: SKP52_13405
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Entry
SKP52_13405 CDS
T03542
Name
(GenBank) Putative secreted protein
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphk01002
]
SKP52_13405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphk01011
]
SKP52_13405
Enzymes [BR:
sphk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SKP52_13405
Peptidases and inhibitors [BR:
sphk01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
SKP52_13405
Peptidoglycan biosynthesis and degradation proteins [BR:
sphk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SKP52_13405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AJA09569
UniProt:
A0A0A7PHW1
LinkDB
All DBs
Position
complement(2868408..2869640)
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AA seq
410 aa
AA seq
DB search
MAGRMKWMSLAAGAVMVGAAAFAAQGGFVGNGGGEARPMVQLPPAAPAAKASTSAASAPA
AASLSATVGGYTYDWTALQAAIDADTEVDNGYFIVGNASDPDYLFAYEKGSFGIDRVTPL
ASASKWFAGALGMRMVQAGIATLDDPMRPPLAFWTTIGTKKDVKLKHALSMTSGFNASPL
VGGCQLLPAMTLYNCAKSIHDLRYDILRPGNAPGAQYSYGPHGLQVAAAYLEAKDISIAP
GTSPARQRNFHELFAQHVTTPLGMTSTTWYDPAGSAPTNPWVAGGAYSTPRDYAKLLRAF
LGGSFITDMTSFTQQRTAGLPRVFVPASAGNWEYALGSFVECDTPSACATSKINSSPGAY
GWTGWIDRETGYYALIATEISSGGDRKGVELEQVMQDLIEDAIANRTPAP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctggaagaatgaaatggatgtcgcttgccgccggtgcagtaatggttggggctgcg
gcctttgcggcgcagggcgggttcgtgggcaacggcggcggcgaggcgcgtcccatggtg
cagcttccgcctgcggcgcccgctgctaaagcgtcgacgtcggcggcatcggcgcccgcg
gccgccagcctttcggccaccgtcggcggatatacctatgactggacagcgttacaggcg
gcaatcgacgccgataccgaggtcgataacggctatttcatcgtcgggaatgcttcggat
cccgactatctcttcgcctatgagaagggcagcttcggtatcgatcgggtgaccccgctt
gcgtcggcctccaaatggttcgccggcgcgctggggatgcgcatggtgcaggcgggcatc
gcgacgctcgacgatccgatgcggccgccgcttgccttctggacgacgatcggaacgaag
aaggatgtcaaactcaagcacgcgttgtcgatgacgtcgggcttcaacgcgagcccgctc
gttggcggatgtcagctgcttccggccatgacgctctacaattgcgcgaagagcatccac
gatctgcgttacgacattctgcgcccgggtaacgcgcccggcgcgcaatatagctatgga
ccgcatggccttcaggtcgccgctgcctatctggaggcaaaggatataagcatcgcgccc
ggcacgtcaccggcacgccagcgcaattttcacgaactgttcgcgcagcatgtgacgacc
ccgctcgggatgacgagcacgacctggtatgaccctgcgggaagcgctcccaccaacccg
tgggtcgcgggcggcgcctattcgacgccgcgcgactatgcgaaacttctgcgtgccttc
cttggcggcagctttattaccgatatgacaagcttcacccagcaacgtaccgcaggcttg
ccgcgcgttttcgtgccggcgagcgcgggcaattgggaatatgcgctcggctcctttgtc
gaatgcgacacgccttcggcctgcgcgacgtccaagatcaattcctcaccgggtgcctat
ggttggaccggctggatcgatcgcgagaccggctattacgctttgatcgccaccgaaata
tcgagcggaggcgaccggaaaggcgtcgagctcgaacaggtcatgcaggatctgatcgag
gatgcgatcgcgaatcgcaccccggcgccctga
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