Sphingopyxis fribergensis: SKP52_13965
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Entry
SKP52_13965 CDS
T03542
Name
(GenBank) VirD4/TraD-like protein
Organism
sphk
Sphingopyxis fribergensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
AAA_19
DUF87
AAA_11
FtsK_SpoIIIE
nSTAND3
WHD_BLACT
AAA_16
AAA_7
GvpD_P-loop
NTPase_1
AAA_22
AAA_30
bpMoxR
HerA_C
DEAD
ResIII
ATPase
Motif
Other DBs
NCBI-ProteinID:
AJA09678
UniProt:
A0A0A7PKG8
LinkDB
All DBs
Position
complement(2985538..2987601)
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AA seq
687 aa
AA seq
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MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFFQTTLAGLSIWVIGAIWYAFEKSDAYQRFV
LTKLVEATFKADAAPGTNDPVLFRTPEGREYWTSADWLVDSAIAKQALEKLESDLISGAI
LSGVFALAALVFAWFYFTRTGKGLGSNEYLRGAHFGTVRQVRRALRRETKGSFSIGGINV
PHAFETEHVLICGAPGTGKTNMIVKMLEGIRAKGKRAIVYDTAGTFVEKFYREGKDILLN
PLDERSAVWSPWVDVPHDYHYDQIAESTIPDKHGDPFWPKAARGTLVAVLRKLAAQGRTY
VSILLHTIVRSPLKDLSAFAAGTDAAAFISMEGERTSAGVQAELASVMRSFAYLDDTDDG
LSIRDWVATEGDDSWLFVTVKADQLPSLRPLITVWLDIAISAIMSLKPDQQRRLYCVIDE
LPSLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVALRAND
TPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRIQVTRPLVMHTEVTNLPNLSGY
LRFGRDLPVVRFADKYNDVPSIVEAFAERSRPPRHIAPPPSLPSSSGTSEEASRSAKPEK
NDAPARKRTGRRGPDVNAPALKLDHPAGASGKSRDNKNGEVSAAPVTPTDGSPDRPATPL
EIIAPHWDRTLRQHGRPGGRRRPARPA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcttccgcaacgacacactcggcagctggacgcggggcggccaagccatcgtc
cacaatgtgcggatgaccacccaggtcttcttccagacgaccctcgccgggcttagcatc
tgggtcatcggcgcgatctggtacgccttcgaaaagtccgatgcctaccagcgcttcgtc
ctcaccaagctcgttgaggcaaccttcaaggccgatgcggcgccgggaaccaacgacccg
gtcctgttccgtacgccggagggccgcgaatattggacctcggccgactggctggtcgac
tccgcgatcgcgaaacaggcgctcgaaaaactcgagagcgacctcatcagcggggcgatc
ctgtccggggtgtttgcgctcgccgcgctcgtcttcgcctggttctatttcacccggacg
gggaaggggctcggctccaacgagtacctgcgcggggcgcatttcggtaccgttcggcag
gtccgccgggcgctgcgcagggagacgaaaggaagcttctcgatcggcggcatcaacgtc
ccccatgccttcgagaccgagcatgtcctgatctgcggtgcacccggaacggggaagacc
aacatgatcgtcaagatgctcgaaggcatccgcgccaagggcaagcgcgcgatcgtctat
gataccgccggcaccttcgtcgaaaaattctaccgcgaggggaaggacatcctgctcaac
cccctcgacgagcgttcggccgtctggtcgccctgggtcgatgtcccgcacgattatcat
tacgaccagatcgcggaatcgacgatccccgacaagcatggcgatcccttctggccgaag
gccgcgcgcggtactctggtcgccgttctgcgcaagctcgcagcgcagggacggacctat
gtatcgatcctcctccacaccatcgtccgctctccgctgaaggatctgtccgccttcgcc
gcgggcaccgatgcggcggcattcatctcgatggaaggcgaacggacgtcggcgggcgtc
caggctgagctcgcgtcggtcatgcgcagcttcgcctatcttgacgataccgacgacggg
ctttcgatccgcgactgggtcgcgaccgagggggacgacagctggctcttcgttaccgtg
aaggccgaccagcttccttcgctccgtcccctgatcaccgtgtggctcgatatcgcgatc
agcgcgatcatgagcctgaaacccgatcagcagcgccgtctctattgcgtgatcgacgag
cttccctcgctccagaaactgccgtcgctctctgactttctcgctcgcgcccgcaaatat
ggcggctgcggcatcctcggcttccagtcctacccgcagctcgaggcgacctatggcatc
caggatgccgcggcgatcaccggctattgctccacctgggtcgcgctccgcgccaacgat
acccccaccgccaagcatgtcagcgagaatctcgggcaagtcgagcaggtcgaggcgaac
gaggggatgagctatggcgtcaacgacatgcgtgacggggtcaacctctcgcgcatccag
gtgacaagacctcttgtgatgcacacggaggtcaccaacctgccgaacctgtcgggctat
ctgcgcttcggtcgcgacctgcccgtcgttcggttcgcggataaatataatgacgtgcca
tccatcgttgaggccttcgccgagcgcagccgtccgcctcgacatatagcaccaccaccg
tcgttgccgtcgtcatccggtacgtccgaagaggcatcaagatcggcgaaaccggagaag
aatgacgcgccagcgcgcaagcggactggcagacgcggaccggacgtcaatgcgcccgcg
ttgaagctcgatcacccggcgggcgcatccggaaaatcgcgtgacaacaagaacggggag
gtctcagccgcacctgtcacgcctaccgatggttcgcccgaccgtcccgcgacgcctctc
gaaattatcgctccgcactgggaccgcaccctgcgacagcatgggcgtccgggtggtcgt
cgccgtccggcgagaccggcatga
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