Sphingopyxis fribergensis: SKP52_14570
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Entry
SKP52_14570 CDS
T03542
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphk03016
]
SKP52_14570 (miaB)
Enzymes [BR:
sphk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SKP52_14570 (miaB)
Transfer RNA biogenesis [BR:
sphk03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SKP52_14570 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AJA09798
UniProt:
A0A0A7PKP9
LinkDB
All DBs
Position
complement(3118532..3119869)
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AA seq
445 aa
AA seq
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MKSDSPKTFHVKSFGCQMNVYDGERMAEMLGAEGYVAAADGADADLVVLNTCHIREKAAE
KVYSDIGRLKRADGSRPTIAVAGCVAQAEGAEIARRAPTVDVVVGPQAYHRLPDMIARAA
RGEKAVDLDMPLESKFGALPKRAGGQRPTAFLTVQEGCDKFCTYCVVPYTRGAEISRPFV
DLIAEARALVAGGAREITLLGQNVNAWDGQDEKGRVIGLDGLIRELAREDGLERIRYTTS
HPNDMTDGLIAAHGEIAKLMPFLHLPVQAGSDRILAAMNRSHSVESYLRIIERVRAVRPD
IAISGDFIVGFPGETDADFEATLDIVRATNYAMAYSFKYSRRPGTPAATMDGQIDEALLN
ERLQRLQALLNEQQQAFNEASVGRTTRLLLERMGKLDGQLIGKTPWLQSAHVIAPGLQIG
DMIDVQITSAGANSVAAEALMEEAA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgactcccccaaaacttttcacgtcaaatccttcggctgccagatgaatgtc
tatgacggcgagcgtatggccgagatgctgggcgccgagggctatgtcgccgccgccgac
ggcgccgacgccgacctcgtcgtgctcaacacctgccacatccgcgagaaagcggccgag
aaggtctattcggacattggccggctgaagagagccgacggcagccgcccgacgatcgcg
gtcgcgggctgcgtcgcgcaggccgagggtgccgaaatcgcgcgccgcgcgcctacggtc
gacgtcgttgtcgggccgcaggcctatcatcgcctgcccgacatgatcgcgcgcgccgcg
cggggagagaaggccgtcgacctcgacatgccgctcgaaagcaagttcggcgcgctgccg
aagcgcgcgggcggccagcgtccgaccgcctttctgacggtgcaggaaggctgcgacaaa
ttctgcacttattgcgtcgtgccctacacgcggggcgccgagatcagccggcccttcgtg
gacctgatcgccgaggcgcgcgcgctcgtcgccggcggcgcgcgcgaaatcaccttgctc
ggccagaacgtcaacgcgtgggacggtcaagatgagaagggcagggtgatcggcctcgac
gggctgatccgcgaactcgcgcgtgaggacggcctcgaacgcatccgctacaccaccagc
caccccaacgacatgaccgacgggttgatcgcggcgcatggcgagatcgccaagctgatg
cccttcctccacctgccggtgcaggcgggcagcgaccgcatccttgcggcgatgaaccgc
agccactcggtcgaaagctatcttcgcatcatcgaacgcgtgcgcgccgtgcgccccgac
atcgcgatctcgggcgacttcatcgtcggcttccccggcgaaaccgatgcggacttcgaa
gcgacgctcgatatcgtccgtgcgaccaattatgcgatggcgtacagcttcaaatattcg
cgccgccccggtacccccgccgcgacgatggacggccagatcgacgaagctctgctcaac
gaacgtctccagcgcctccaggcgttgctcaacgaacagcagcaggcattcaatgaggcg
tccgttggccgcacgacgcgcctgctcctcgaacgcatgggcaagctggacggtcagttg
atcggcaagacgccctggctccagtcggcgcacgtcatcgcaccggggctccagatcggc
gatatgatcgacgtgcagatcacctcggccggcgccaacagcgttgccgccgaagcgttg
atggaagaagccgcctag
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