Sphingopyxis fribergensis: SKP52_14815
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Entry
SKP52_14815 CDS
T03542
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00470
D-Amino acid metabolism
sphk00550
Peptidoglycan biosynthesis
sphk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SKP52_14815 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SKP52_14815 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphk01011
]
SKP52_14815 (murD)
Enzymes [BR:
sphk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SKP52_14815 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphk01011
]
Precursor biosynthesis
Amino acid ligase
SKP52_14815 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AJA09845
UniProt:
A0A0A7PIM0
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All DBs
Position
complement(3165793..3167097)
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AA seq
434 aa
AA seq
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MISSRVFAGRRYAVLGLARSGLATVEALVASGAGVTAWDDREEARDDAMALGADIGNPLE
IDLIGFAGVVVSPGVPLNRHPIAAHAREAHVPVIGDVELFAEARGDLPPHKVVGITGTNG
KSTVTALITHMLESAGVPTLMGGNIGLPILSRDPLPEGGVYVLELSSYQIDLSHSLACDV
AVLTNLSPDHLDRYDGFAGYAASKARLFGLQHRDQVAIVAVDDDPSKMIASRINHRLHRV
SGKDIDPVDQARWPALQGPHNAQNAVCAIAVCRVLGLNDEQIERGLATYKSLPHRMELVG
EVGGVSWFNDSKATNAASAAPALAAFPPAPDQRLHWIAGGKAKGDGLAACRPWFGHVKKA
YLIGEAMEPFAAEIGDAIRVERSGDIATAVKQAAAAAKPGDIVLLSPACASFDQFKDYEQ
RGDVFRAAVQALGA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgatttcctcgcgcgtctttgccggccgccgctatgcggtgctgggactggcgcgctcg
ggtctggcgaccgtcgaggcgctcgtcgccagcggcgcgggcgtcacggcgtgggacgac
cgcgaggaagcccgcgacgacgcgatggcgctcggcgccgatatcggcaatccgctcgaa
atcgacctgatcggctttgcgggcgtcgtcgtctcgcccggcgtgccgctgaaccgccat
ccgatcgccgcgcatgcgcgcgaggcgcatgtgccggtgatcggcgatgtcgaactcttc
gccgaggcgcgcggcgacctgccgccgcacaaggtggtcggcatcaccggcaccaacggc
aagtcgacggtgacggcgctgatcacgcacatgctggaaagcgccggcgtgccgacgttg
atgggcggaaacatcggcctgccgatcctcagccgcgacccgctgccggaaggcggtgtc
tatgtcctcgaactttcgagttatcagatcgacctgtcgcacagtctcgcttgcgatgtc
gcggtgctcaccaaccttagccccgaccacctcgaccgctatgacggtttcgccggttac
gcagcgtcaaaggcgcgcttgttcggcctgcagcatcgcgatcaggtcgcgatcgtcgcg
gtcgacgacgatccgtcgaagatgatcgcgagtcgcatcaaccaccgcctccaccgcgtg
tcgggcaaggatatcgacccggttgaccaagcgcgctggccggccttgcaggggccgcac
aatgcgcagaacgccgtgtgcgcgatcgcggtgtgccgcgtgctggggctgaatgacgaa
cagattgaacgcggtctcgcgacctacaagtcgctgccgcaccgaatggaattggtcggc
gaagtcgggggggtcagctggttcaatgacagcaaggctaccaatgcggcttccgctgca
ccggcgctggcggcatttccgccagcgccggaccagcgtctgcactggattgcgggcggc
aaggccaagggcgacggcctcgcggcgtgtcgtccatggttcggccatgtaaaaaaggcc
tatctgatcggcgaggcgatggagccgttcgcggccgagatcggcgatgcgattcgggtc
gagcgctcgggcgacatcgcaacggctgtcaaacaagccgccgcggcagcgaagccgggc
gatatcgtcctgctgtcgccggcctgcgcgtcgttcgaccagttcaaggattatgagcag
cgcggcgatgtgtttcgtgcggctgttcaggcgctcggggcatga
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