Sphingopyxis fribergensis: SKP52_14870
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Entry
SKP52_14870 CDS
T03542
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_14870
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_14870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
TrbC_Ftype
Motif
Other DBs
NCBI-ProteinID:
AJA09856
UniProt:
A0A0A7PI96
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All DBs
Position
3177741..3179867
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AA seq
708 aa
AA seq
DB search
MRLLCSAGFTFALFLAVPAFAQDRAAAGSDDDVHTGEPIIVTAPYVRSLDILGNVSVLEG
DELARDIRGQIGDTLTRQPGVSATSFSPGASRPVLRGFSGERVKVLTDGIGSIDASNTSA
DHAVTIDPLTVERIEILRGPAVLLFGSQAIGGAVNLFDRRIPRKVPADHVHIDAIGGYAT
AANDRNIGSSIDVALSPQIVAHLDGSWRKTGDVRTGGFVYAPDIRGDLLHLAEHEVEEGH
LDEADELTAQAGKRGKVDNTQSETWTAGGGISLINDGGQLGISVGYFDTNYGVPDRPNTA
HDHGGEEEEGGHDHGEGPVTIGMKQWRADLRSEVELGDGFFDKLRIRAGFADYKHTEFEG
DEVGTVFTNQGIEGRLELAQNDRGGWRGASGVQYSHRDFDAIGAEAFVPRNLTDQLALFT
LQEYTMGPLGLEAAARYEKTNVRAQTVGFERNFDSFSGALGATYDIFGGAKFGVSVSRAV
RAPSAEELLSNGPHIATQSFELGDPNLKRESNWGAEASFKFKSDAFNLSLTGYSNWFDNF
IYSAATGAEQDELPVFQYFQRDARVYGFEAEASARLAQIGGFNIVGDVTADMTRAKIKNA
GLDRNVPRIPPLRVLGGLEAQGERVDARVEVEWTDDQTRTAQFETPTDGFTLVNASLSWK
PLPNSKNLTLSLSANNIFDVEARRHASFTKDYVPLAGRDFRLTARASF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgctttgctccgccggatttaccttcgcactcttcctcgccgtcccggctttt
gcacaggaccgcgccgccgcgggcagcgacgatgatgtgcacaccggcgagccgatcatc
gtcaccgcaccctatgtccgcagcctcgacatcctcggcaatgtatcggtgctcgaaggc
gacgagctggcgcgcgacattcgcgggcagatcggcgacacgctgacgcggcaaccgggc
gtatcggcgaccagcttctcccccggcgcgtcgcgccccgtcctgcgcggcttttcgggc
gagcgcgtcaaggtcctgaccgacggcatcggatcgatcgacgcctcgaatacctcggcc
gaccatgcggtgacgatcgatccgctgaccgtcgaacgcatcgaaatcctgcgcggcccc
gcggtgctgctgttcggcagccaggcgatcggcggcgcggtcaacctgttcgaccgtcgc
attcccagaaaagtccccgccgaccatgtccatatcgatgcgatcggcggctatgcgact
gcggcgaacgaccgcaatatcggcagctcgatcgacgtcgcgctgagcccgcagatcgtc
gcgcacctcgacggcagctggcgcaagaccggcgacgtccgcaccggcggcttcgtctat
gcccccgatattcgcggcgacctgctccaccttgccgagcatgaggtcgaggaaggccat
ctcgacgaagccgacgaactgaccgcacaggcaggaaagcgcggcaaggtcgacaatacg
cagagcgaaacctggaccgcaggcggcgggatttcgttgatcaacgacggcggccagctc
ggcatttcggtcggctacttcgacaccaattacggcgtgcccgaccggccgaacactgcg
catgatcatggcggcgaggaagaagagggcggccacgaccatggcgaaggccccgtcacg
atcggcatgaagcaatggcgcgccgacctgcgcagcgaagtcgagctgggcgacggcttc
ttcgacaagctgcgcatccgcgcgggctttgccgactacaagcacaccgagttcgagggc
gacgaagtcggcaccgtcttcaccaaccagggcatcgaaggccgcctcgagctggcgcag
aacgaccgcggcggctggcgcggcgcgagcggcgtgcaatatagtcaccgcgacttcgac
gcgatcggcgccgaggcgttcgtgccgcgcaacctgaccgaccagctcgcgcttttcacg
ctgcaggaatatacgatgggcccgctcgggctcgaagctgcggcgcgttatgaaaaaacc
aatgtgcgcgcgcaaacagtcggtttcgaacgcaatttcgacagcttctcgggcgcgctc
ggggcgacttatgatatcttcgggggcgcgaaattcggcgtttcggtatcgcgcgcggtg
cgtgcgccgtcggccgaagagttgctgtcgaacggtccgcacatcgcaacgcagagcttc
gagctgggcgacccgaatttgaagcgcgaatccaactggggcgccgaagcctcgttcaag
ttcaaatccgacgcgttcaacctcagcctgaccggctattcgaactggttcgacaatttc
atctattcggctgcgaccggcgcggaacaggatgaactgcccgtcttccaatatttccag
cgcgatgcccgcgtctatggcttcgaggctgaggcgagtgcgcgcctggcgcagatcggc
gggttcaacatcgtcggcgatgtcaccgcggacatgacgcgcgcgaagatcaagaatgcg
gggctcgaccgcaacgtcccgcgcatcccgccgctccgcgtgcttggcgggctcgaagcg
cagggcgaacgcgtcgatgcgcgcgtcgaggtcgaatggaccgacgaccagacgcgcacc
gcacagttcgagacgcccaccgatggcttcaccctggtcaacgcctcgctcagctggaag
ccgcttcctaatagtaagaatctgacgctcagcctgtcggcgaacaatatcttcgacgtc
gaagcgcgccgccacgccagcttcaccaaggattatgtgccgctggccggccgcgatttc
cggctgacagcccgggcgagcttctaa
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