Sphingopyxis fribergensis: SKP52_16075
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Entry
SKP52_16075 CDS
T03542
Name
(GenBank) GntR family transcriptional regulator
KO
K05836
GntR family transcriptional regulator, histidine utilization repressor
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_16075
Transcription factors [BR:
sphk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SKP52_16075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
HTH_41
MarR
MarR_2
Fe_dep_repress
HTH_27
TrmB
HTH_IclR
DUF4423
HTH_69
DnaD_N
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AJA10090
UniProt:
A0A0A7PJB6
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All DBs
Position
complement(3429773..3430453)
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AA seq
226 aa
AA seq
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MNPARRIRDEIAAAIQSGEWRPGDRVPTEQELAARYRCARATVSKALGELAAMGLVERRR
KAGTFVAHPPVHSAVMTVPDLAELIAARGEVYRWDLASVETVKTDDDLLAGTALRIEGVH
MAAGEAFALERRFIALGEVPEAADADFAKEAPGTWLLGHIPWTQARHVIRAVTPTHKEAA
LLAIGASAACLELDRMTWRAGRVVTHVRQLFRGDRFDLIADFNAGP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccctgcccgccgcatccgcgacgagattgccgccgcgatccagtcgggcgagtgg
cgccccggcgaccgcgtgcctaccgaacaggagctcgccgcgcgctatagatgcgcgcgc
gcgacggtgagcaaggcgctcggcgaactcgcggcaatggggctggtcgaacgccgccgc
aaggcgggaaccttcgttgcgcatccgccggtccattcggcggtgatgaccgtgcccgac
cttgcggaactgattgcagcgcgcggcgaggtttatcgatgggatctggcgtcggtcgaa
accgtgaagacggatgacgatctgctcgccggaacggcgttgcggatcgagggtgtgcac
atggcggcgggcgaagcctttgcgctcgaacggcggttcattgcgctgggcgaagttccc
gaggcggcggacgcggactttgcaaaggaagcgcctggaacctggctgctcgggcatatt
ccgtggacgcaggcgcgccatgtcattcgcgcggtgacgccgacgcacaaggaagcagca
ttattggctatcggtgcgagcgccgcctgcctcgaactcgaccgcatgacgtggcgcgcg
gggcgcgtcgtgacgcatgtgcggcaactgtttcgcggtgatcgcttcgacttgatcgcc
gatttcaacgccggcccttag
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