Sphingopyxis fribergensis: SKP52_16905
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Entry
SKP52_16905 CDS
T03542
Name
(GenBank) Site-specific recombinase
KO
K06400
site-specific DNA recombinase
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
SKP52_16905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Zn_ribbon_Top1
DUF1421
2CompARG
Herpes_glycop_D
Motif
Other DBs
NCBI-ProteinID:
AJA10253
UniProt:
A0A0A7PM27
LinkDB
All DBs
Position
complement(3590680..3592335)
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AA seq
551 aa
AA seq
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MTAPQTITGARAALYLRVSTARQAEHDVSIPDQRRQGEGWCAARGYKVVDTYVESGASAT
NDRRPEFQRLIEAGTSKPAPFDLVVVHSFSRFFRDHFELEFYIRKLAKNGVKLVSITQEM
GDDPMHVMMRQIMALFDEYQSKETAKHVLRAMRENARQGFWNGSLPPIGYRVVAAEQRGA
KVKKRLEIDPFHAETVRTIFRLALQGDGTSGSMGVKAIAAWLNERSIRTRDGGRWGLGAV
HQILTRSTYTGRHEFNRRGKDRKLKPKSEAVVVDVPPIIAQETFEAVQAHMQARNPKKVP
PRVVSGPTLLTGLIHCAKCGGAMTIRTGKGGLYRYYACSTKARQGPTACDGMSVPMEKLD
DLVASHLETRLLQPDRLERLLSAILDRRQEQAVRKRTHVAELNKRATETDLRLKRLYDAI
ENGVADVEDPDLKERIATLKATRDQAKADAERVTALLGATGRKSIAPDMLAKFASVARER
MRVEGGGYRRDHIRALAQRVEVDVGEVRILGSKSNLLQALIAGATETKPGVVPSFVPKWC
ARQDSNLRPPA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccgcagacgataacgggggcgcgcgcagccctctatcttcgggtctcgacg
gctcggcaggcggagcatgatgtgtcaatccccgaccagcggcgacagggcgaaggctgg
tgcgcggcgcgcgggtacaaggttgtcgatacctatgttgaatcgggcgcctcggcgacg
aatgatcgtcgccccgagttccagaggctgatcgaagccgggacatcgaaaccggcgccg
ttcgacctcgtggtcgtccacagcttctcgcgcttcttccgcgatcatttcgagctggag
ttctatatccgcaagctcgccaagaatggcgtgaagctcgtctccatcacgcaagagatg
ggcgacgatccgatgcacgtcatgatgcgccagatcatggcgctgttcgacgagtatcag
tccaaggagaccgccaagcatgtgctgcgcgccatgcgcgagaacgcacggcaaggcttc
tggaacggctcgctgccgccgatcggctatcgggtggtcgccgccgaacagcgcggcgcc
aaggtcaagaagcggctggagattgaccccttccatgccgagaccgtgcggaccatcttc
cgcctcgcattgcagggtgacggcacttcggggtcgatgggcgtcaaagccatcgccgct
tggctcaacgagaggtccattcgcacccgcgacggcggacgttggggtcttggtgcggtc
caccagattctcacccgctcgacctataccgggcgacacgagttcaaccggcggggcaag
gaccggaagctaaagccgaagtctgaggccgtcgtcgtcgatgtccccccgatcatcgca
caggagacgtttgaagcggtgcaggcgcacatgcaggctcgcaatcccaaaaaggtgccg
ccccgcgtcgtaagcggccccacgctgcttaccggcctcattcattgcgccaagtgcggc
ggagcaatgacgatccgtaccggcaagggcggactgtatcgttactatgcctgctcgacc
aaggcgcggcaggggccgaccgcttgtgacggcatgagcgttccaatggaaaagctggac
gatctggttgcgagccatctggaaacgcggctgctgcaacccgaccggctggaacgcctc
ctttcggccattctagatcggcggcaggagcaggcggttcgtaagcgcacccacgtcgcg
gagctgaacaagcgggcgaccgaaaccgatttgcggctcaagcgcctctatgacgcaatc
gagaacggtgttgccgacgtggaagacccggaccttaaggagcgcatcgccacgctcaag
gcgacacgcgatcaggcaaaggctgacgccgaacgggtgacggccttactcggcgctacg
ggccgaaagtcgatagcacctgatatgctggcgaagttcgccagcgtcgcgcgcgagcgg
atgcgggtagaaggcggcggctatcggcgcgatcatatccgcgcgcttgcacagcgcgtt
gaggtcgatgttggcgaggttcggattctcggctcgaaaagcaatctgctgcaagcgctg
attgcgggggccaccgaaacaaagccgggcgtcgtgcccagctttgttccgaagtggtgc
gcccggcaggattcgaacctgcgaccacccgcttag
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