Sphingopyxis fribergensis: SKP52_16965
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Entry
SKP52_16965 CDS
T03542
Name
(GenBank) hypothetical protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_16965
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SKP52_16965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AJA10265
UniProt:
A0A0A7PJT8
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All DBs
Position
3606052..3606453
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AA seq
133 aa
AA seq
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MAGIRGKDTTPEVRLRKALHSAGFRFRLHSAKLPGRPDIVLTRFHAAVFVHGCFWHRHEG
CRNASVPKSNAAFWAEKFAKNAERDAMNLTGLKELGWRVAIAWECAIRRRGAADVAAELA
DWLISGGAEIEIG
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcagggggaaggatacgacgcccgaagtgcgcctgcgcaaagcattgcat
agcgcagggttccgattccggctgcattcggcaaaactgccgggcagacccgacatcgtt
cttaccagatttcatgctgcagtattcgtccacggctgtttctggcaccgccacgaagga
tgccgcaacgcttcggtcccgaaatccaatgctgctttctgggcggagaagtttgccaag
aacgctgagcgtgacgcgatgaatcttaccggtttgaaggaactggggtggcgtgtcgcg
atcgcctgggaatgtgcaatccgccgcaggggggcggcagacgtcgccgcagaactggcc
gactggctgataagcggtggtgcagaaatcgagatcggctga
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