Sphingopyxis fribergensis: SKP52_17400
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Entry
SKP52_17400 CDS
T03542
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00020
Citrate cycle (TCA cycle)
sphk00190
Oxidative phosphorylation
sphk00650
Butanoate metabolism
sphk00720
Other carbon fixation pathways
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
Module
sphk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SKP52_17400 (sdhA)
00650 Butanoate metabolism
SKP52_17400 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SKP52_17400 (sdhA)
00720 Other carbon fixation pathways
SKP52_17400 (sdhA)
Enzymes [BR:
sphk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SKP52_17400 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
Motif
Other DBs
NCBI-ProteinID:
AJA10351
UniProt:
A0A0A7PJQ0
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All DBs
Position
complement(3686858..3688660)
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AA seq
600 aa
AA seq
DB search
MTEAYKIIDHIYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNSPDHWQWHMYDTVKGSDWLGDQDAIEYMVREAPNAVYELEHAGVPFSRNQDGTIYQ
RPFGGHMQNMGEGPPVQRTAAAADRTGHAMLHALYQQSLKYDADFFVEYFALDLIMEDGA
CRGVIAMCLEDGSIHRFRSQAVVLATGGYGRSYFTATSAHTCTGDGGGMVLRAGLPLQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMALE
IREGRGVGPHKDHIFLHLDHIDPAVLHERLPGITESGKVFAGVDLTRQPLPVVPTVHYNM
GGIPCNYHGEVVTLGKDGPDTVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGH
RLKEIITPGAAQQPLPKDSADLALGRLDHFRNANGGSPTAEIRLEMQRAMSAHAAVFRTD
ELMAEGKEKLTKTYQRMNDIHVTDRSLIWNTDLIETLELDNLISQATVTMHSAFNRKESR
GAHAHEDFPNRDDANWMKHTISWFDGWGGKGGGVRLDYRPVHEYTLSDDVEYIKPKARVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcctataagatcatcgaccatatctatgacacagtcgtcgtcggggccggc
gggtcgggcctgcgcgccacgatgggcagcgccgaagccggactcaagaccgcctgcatc
accaaagtgttcccgacacgcagccacaccgttgccgcgcagggcggcatcgccgcctcg
ctcggcaacaattcgcccgaccattggcagtggcatatgtacgacaccgtcaagggctct
gactggctcggcgaccaggacgcgatcgaatatatggtgcgcgaggcgccgaacgcggtc
tatgaactcgagcacgccggcgtgccgttcagtcgcaatcaggacggcaccatctaccag
cgcccgttcggcggccatatgcagaatatgggcgaaggcccgccggtgcagcgcaccgcc
gcagcggccgaccgcaccggccatgcgatgctccacgcgctctatcagcagagcctgaag
tacgacgctgacttcttcgtcgaatatttcgcgctcgacctgatcatggaagacggcgcc
tgccgcggcgttatcgcgatgtgcctcgaggatggcagcatccaccgtttccgctcgcag
gccgtcgttctcgcgaccggcggttatggccgcagctatttcaccgcgacctcggcgcat
acctgcaccggtgacggcggcggcatggtgctgcgcgccggcctgcctttgcaggacatg
gaattcgtccagttccacccgaccggcatctacggcgccggcgtcctcatcaccgagggc
gcgcgcggcgagggcggttatctcaccaattccgagggcgagcgtttcatggaacgctac
gccccctcggcgaaggatctggcatcgcgcgacgtcgtctcgcgttcgatggcgctcgaa
atccgcgaaggccgcggcgtcggcccgcacaaggatcatatcttcctgcacctcgatcat
atcgatcccgcggtgctccacgaacgccttccggggatcaccgaaagcggcaaggttttc
gcgggcgtcgacctgacgcgccagccgctgcccgtcgtaccgacggtccattataatatg
ggcggcatcccttgtaactatcatggcgaagtcgtgaccttgggcaaggatggccccgac
accgtcgtccccggcctgttcgcggtcggtgaagcggcgtgcgtgtcggtccacggcgcg
aaccgcctcggctcgaacagcctgatcgacctcgtcgtctttggacgcgcgacgggtcac
cggctcaaggaaatcatcacccccggcgcggcacaacagccgctgcccaaggacagcgcc
gaccttgcgctcggccgcctcgaccatttccgcaacgccaatggcggctcgccgaccgcc
gaaatccgcctcgaaatgcagcgcgcaatgtctgcgcacgccgcggtgttccgcaccgac
gaactgatggccgagggcaaggaaaagctgaccaagacctatcagcggatgaacgacatc
catgtcaccgaccgcagcctgatctggaacaccgacctcatcgaaacgctcgagctcgac
aacctgatttcgcaggcgaccgtgacgatgcattcggcgttcaaccgcaaggaaagccgc
ggcgcgcacgcgcacgaggatttcccgaaccgcgacgacgcgaactggatgaagcacacg
atcagctggttcgacggctggggcggcaagggcggcggcgtccgcctcgattaccgtccg
gtccacgaatatacgctgtcggacgacgtcgaatatatcaagccgaaggcgcgcgtttac
tga
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