Sphingopyxis fribergensis: SKP52_17815
Help
Entry
SKP52_17815 CDS
T03542
Name
(GenBank) tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00020
Citrate cycle (TCA cycle)
sphk00620
Pyruvate metabolism
sphk00720
Other carbon fixation pathways
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01120
Microbial metabolism in diverse environments
sphk01200
Carbon metabolism
Module
sphk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SKP52_17815
00620 Pyruvate metabolism
SKP52_17815
09102 Energy metabolism
00720 Other carbon fixation pathways
SKP52_17815
Enzymes [BR:
sphk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SKP52_17815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Tox-WTIP
Motif
Other DBs
NCBI-ProteinID:
AJA10433
UniProt:
A0A0A7PMG6
LinkDB
All DBs
Position
3769551..3771074
Genome browser
AA seq
507 aa
AA seq
DB search
MNTVIIREDDLIETIADALQYISYFHPMDYIRALGAAYEREVSPAAKDAMAQILSNSRMC
AEGHRPICQDTGIVTVFIKWGMDCRLDSPRSLQQVVDEGVRKAYLHPDNKLRASILADPA
FSRVNTKDNTPSVLNVEMVPGAKVHIDVAAKGGGSENKSKFKMMNPSDSIVDWVLEMVPQ
MGAGWCPPGMLGIGIGGTAEKAMLLAKQSLMDPIDMTELLARGPSSPTEELRIELYEKVN
ALGIGAQGLGGLATVLDVKIADWPTHAASKPVAMIPNCAATRHAHVTLDGSGPAYLEPPV
LADYPQIDWQPDQAAIRVDLDTLTPEVVASWKQGDRLLLNGKMLTGRDAAHKRIAEMLAK
GEELPVSFRDRVIYYVGPVDPVGEEIVGPAGPTTATRMDKFMDMMLDQGLLACVGKAERG
PAATQAIAKHKSAYLMAVGGAAYLVARAIKGSQVVGFADLGMEAIYEFEVQDFPVTVAVD
SEGQNVHVNAPMLWQKRIKDEGLLEKA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgtgatcatccgcgaagacgatctgattgagacgatcgccgacgcgctccag
tacatcagctatttccatccgatggactatatccgcgcgctcggcgccgcctatgaacgc
gaagtctcgcccgccgcgaaggacgcgatggcgcagatactctcgaacagccgcatgtgc
gccgaggggcaccgcccgatctgccaggacacgggcattgtcaccgtcttcatcaaatgg
ggcatggactgccgcctcgacagcccgcgcagcctgcaacaggtcgtcgacgagggcgtg
cgcaaagcctatctccaccccgacaacaagctccgcgcctcgatccttgccgatccggca
ttcagccgcgtgaacaccaaagacaacaccccgtcggtgctcaatgtcgagatggtcccc
ggcgcgaaggttcatatcgacgtcgccgcgaagggcggcggcagcgagaataagtcgaaa
ttcaagatgatgaacccgtccgacagcatcgtcgactgggtgctcgaaatggtgccgcag
atgggcgcgggctggtgtccgccgggcatgctcggcatcggcatcggcggcaccgccgaa
aaggcgatgctgctggcgaaacaatcgctaatggacccgatcgacatgaccgaactgctc
gcgcgcgggccgtcgtcgccgaccgaggaactgcgcatcgagctttatgaaaaggtcaat
gcgctcggcatcggcgcgcaggggctcggcggcctcgcgaccgtgctcgacgtcaagatc
gccgactggccgacccacgcggcgtcgaaacccgtcgcgatgatcccgaactgcgccgca
acgcgccacgcgcatgtaacgctagacggcagcggccccgcctatctcgaaccgccggtc
ctcgccgattatccgcaaatcgactggcagcccgatcaggcggcgatccgcgtcgacctc
gatacgctgacccctgaagtggtggcgagctggaagcagggcgaccgcctactgctcaac
ggcaagatgctcaccggccgcgacgccgcccacaagcgcatcgccgagatgctcgcaaaa
ggcgaagagctgccggtcagcttccgcgaccgcgtcatctactacgtaggcccggtcgat
ccggtcggcgaggaaatcgtcggccccgcgggcccgacgaccgcgacgcgcatggacaag
ttcatggacatgatgctggaccagggcctgctcgcctgcgtcggcaaggccgaacgcggc
cccgccgcgacgcaggcgatcgccaagcacaagagcgcctatctgatggcggtcggcggc
gcggcgtacctcgtggcgcgtgcgatcaagggcagccaggtcgtgggcttcgccgacctc
ggcatggaggcgatctacgagttcgaggtccaggacttccccgtcaccgtcgcggtcgac
agcgagggccagaatgtccacgtcaacgcgccgatgctgtggcaaaagcggatcaaggac
gaggggttgctggagaaggcgtga
DBGET
integrated database retrieval system
