KEGG   Sphingopyxis fribergensis: SKP52_18020
Entry
SKP52_18020       CDS       T03542                                 
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sphk  Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:sphk03110]
    SKP52_18020 (clpB)
Chaperones and folding catalysts [BR:sphk03110]
 Heat shock proteins
  HSP100
   SKP52_18020 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 AAA_22 AAA_16 nSTAND3 Sigma54_activat RuvB_N IstB_IS21 Mg_chelatase TniB AAA_7 AAA_24 AAA_25 bpMoxR AAA_14 AAA_3 NACHT NBD_SMAX1 DNA_pol3_delta2 T2SSE Seadorna_VP6 TMCO5
Other DBs
NCBI-ProteinID: AJA10474
UniProt: A0A0A7PKF5
LinkDB
Position
3822497..3825076
AA seq 859 aa
MNLEKFTDRAKGFLQAAQTIAIRMNHQRISPEHIAKALLEDNEGMAVGLIAKSGGDAARA
VQGIDALLAKVPAVSGSGAQQTPGLDNDAVRLLDQAEQVASKAGDGYVTVERLLLAMALS
APTPVGKAFADAGVKADALNAAINELRGGRTADTASAEDRYEALKKFARDLTEVAREGKL
DPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPDSLKDRRL
LSLDMGALIAGAKYRGEFEERLKGVLDDVKAAEGEIILFIDEMHTLVGAGKGEGAMDASN
LLKPALARGELHCIGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDSISILRGLKEKY
ELHHGVRITDAAIVAAATLSNRYISDRFLPDKAIDLMDEAASRIRMEVESKPEEIETLDR
RIIQMKIEESALSKESDAASKDRLAALRAELANLEQQSAGLTQKWHAEKEKIHAEAKIKE
ELDAARSALDQAQRAGDLAKAGELSYGTIPSLEKQLADAEAAAGNAMLREEVTADDIAAV
VSKWTGIPVDRMMEGEREKLLGMEGTLTQRVIGQDKAVRAVSTAVRRARAGLQDPNRPLG
SFLFLGPTGVGKTELTKALARFLFDDDNAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEG
GTLTEAVRRRPYQVVLFDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFTNTLIILTSN
LGSQAIAALPDDAPVEQAEPAVMEVVRAHFRPEFLNRLDEIVLFNRLAQQHMGGIVDIQV
ARVQKLLADRKVTLDLTDAARAWLGRVGYDPVYGARPLKRAVQKYLQDPLADLILKGEVK
DGQAIKVDEGDGALVLLPT
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgaacctcgaaaaatttaccgaccgcgccaagggctttttgcaagccgcccagacgatt
gcgatccgcatgaatcaccagcggatttcgcccgaacatatcgccaaggcgctgctcgaa
gacaatgaaggcatggccgtcggcctgatcgcgaagagcggcggcgacgccgcgcgcgcg
gtccagggcatcgacgcgctgctcgccaaggttcccgccgtgtcgggatcgggcgctcag
cagacgccgggcctcgacaatgacgcggtgcgcctgctcgaccaggcggaacaagtggcg
tccaaggcgggtgacggctatgtcaccgtcgaacggctactgctcgcgatggcgctttcg
gcgcccactccggtaggcaaggcctttgccgatgccggcgtgaaggccgatgcgcttaac
gccgcgatcaacgaattgcgcggcggccgcaccgccgacacggcctcggccgaagaccgt
tatgaggcgctcaagaaattcgcacgcgacctcaccgaagtcgcgcgcgagggcaagctc
gatcccgtcatcggccgcgacgaggaaatccgccgcaccgtgcagatcctcgcccgccgg
accaagaacaaccccgtcctcatcggcgagcccggcgtcggcaagaccgcaatcgccgaa
gggctggcgctgcgcatcgtcaacggcgacgtgcccgacagtttgaaggaccgccgcctg
ctgtcactcgacatgggcgcgctgatcgcgggcgccaaatatcgcggcgagttcgaggag
cggctcaaaggcgtgctcgacgatgtgaaggccgccgagggcgagatcatcctgttcatc
gacgagatgcacacgctcgtcggcgcgggcaagggcgagggcgcgatggatgcgtcgaac
ctgctcaagcccgcactcgcacgcggcgaactccattgcatcggagcgacgacgctcgac
gaatatcgcaagcatgtcgaaaaagaccccgcgctgcagcggcgcttccagccggtcttc
gtcggcgagccgacggtcgaggattcgatctcgatcctccgcggtctcaaggaaaaatac
gagctgcaccacggcgtgcggatcaccgatgcggcgatcgtcgccgcggcaacgctgtcg
aaccgctatatctccgaccgcttcctgcccgacaaggcgatcgacctgatggacgaggcc
gcgagccgcatccgcatggaggtcgaatcgaagcccgaggagatcgagacgctcgaccgc
cgcatcatccagatgaagatcgaggaatcagcgctgtcgaaggaaagcgacgccgcgtcg
aaggaccggctcgcggcgttgcgcgccgaactcgccaatctggagcagcaatcggcgggc
ctgacgcagaagtggcacgccgaaaaggagaagatccacgccgaggccaagatcaaggaa
gaactcgacgccgcgcgatcggcgctcgatcaggcgcagcgcgccggcgacctggcaaag
gcgggcgagctcagctacggcacgatccccagcctcgaaaagcagctcgccgacgccgaa
gccgcagcgggcaatgcgatgctgcgtgaagaagtcaccgccgacgacatcgccgcggtg
gtcagcaaatggaccggcatccctgtcgaccggatgatggaaggcgagcgcgagaaattg
ctcggtatggaaggcacgctgacgcagcgcgtgatcggccaggacaaggccgtccgcgcc
gtgtcgaccgctgtgcgccgcgcgcgcgccggtctgcaggacccgaaccgcccgctcggc
agcttcctcttcctcggccccacgggggtcggcaagaccgagctgaccaaggcgctcgcg
cggttcctgttcgacgacgacaatgcgatggtccgcatcgacatgtccgaattcatggaa
aagcacagcgtcgcgcggctcgtcggcgcgcccccgggttatgtcggttacgaagagggc
ggcacgctgaccgaagcggtgcggcgccggccgtatcaggtcgtgctgttcgacgaggtc
gagaaagcgcatcccgacgtgttcaacatcctcctgcaggtgctcgacgacgggcgcctg
accgacgggcaggggcgcacggtcgatttcaccaacacgctgatcatcctgacctcgaac
ctcggcagccaggcgatcgcggcgctccccgacgatgcaccggtcgaacaggcggagcct
gccgtcatggaagtggtgcgcgcgcatttccggcccgagttccttaaccggctcgacgag
atcgtgctcttcaatcggctggcgcagcaacatatgggcggcattgtcgatattcaggtc
gcgcgcgtccagaaattgctcgccgatcgcaaggtgacgctcgacctcaccgatgccgcg
cgcgcgtggctcggccgcgtcggttacgatccggtctatggtgcccggccattgaaacgc
gcggtgcagaaatatctgcaggacccgctcgccgacctgatcctgaagggcgaggtcaag
gacggacaggcgatcaaggtcgacgaaggcgacggggcgctggtgctgctccccacctga

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