Sphingopyxis fribergensis: SKP52_18225
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Entry
SKP52_18225 CDS
T03542
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphk03016
]
SKP52_18225
Enzymes [BR:
sphk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SKP52_18225
Transfer RNA biogenesis [BR:
sphk03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SKP52_18225
Prokaryotic type
Methylthiotransferases
SKP52_18225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
AJA10515
UniProt:
A0A0A7PKI2
LinkDB
All DBs
Position
3862651..3863958
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AA seq
435 aa
AA seq
DB search
MSASLVDRQEVVNFGCRLNIAEGEAIRSAVEAAGARDTIVFNSCAVTDEAVRQARQAVRR
ALRERPGAEVVVTGCAAELEAETFAAMGARVVSNDAKGLVESYGNTVSPRRRGPISGALH
LESAGDGPLPSQGHTASYTPALSGADHARAFLGVQTGCSHSCTFCATVLARGTARSASVD
AVVASAQTALDRGQREIILTGVDLASYGDDSGTSLATLVEALLALPVERLRLSSLDPDRI
DDALFALLTQEKRVMPHVHLSLQAGDDMVLTRMKRRHRRADAVRLTERLKAARAEIAVGA
DLIAGFPTEDEAMFANSLALIDDCDIVFGHIFPYSPRAGTPAARMPQVGRTMARERAAVL
REANARRRQDWLDTQIGRTASMLVERDGVSGHAENFAAMALTAPAAPGTVISVRLTARDG
DRMIATPTQAKDNAA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatctctcgtcgaccggcaagaggtcgttaatttcggttgccggctgaatatc
gccgaaggggaggccatccggtctgccgtcgaggcggcaggcgcacgcgatacgatcgtg
ttcaacagctgcgcggtgaccgatgaggcggtgcggcaggcacgccaggcggtgcggcgg
gcgctgcgcgagcggccgggcgccgaggttgtggtgacggggtgcgcggcggaactggag
gccgagacctttgcggcaatgggtgcccgggtggtgtccaatgacgcgaaggggctggtc
gagagttacggaaacaccgtgtccccgcgaaggcggggacccatctccggtgcgctccat
ctggaatcggcaggagatgggcccctgccgtcgcaggggcacacggcatcctacacccca
gccctgtcgggcgccgaccatgcgcgcgctttcctcggcgtccagacgggctgttcacac
agctgcacattttgcgcgacggtgctggcgcgcgggacggcgcgatcggcgagcgtcgac
gctgtggtcgcttccgcgcaaaccgcattggatcgcgggcagcgcgagatcatcctgacc
ggggtcgaccttgccagctatggcgacgacagcggtaccagccttgcgacgctcgtcgag
gcgctgctggcgctgccggtcgagcgcctccgcctctcgtcgctcgacccggaccggatc
gacgacgcacttttcgccttgctgacgcaggaaaagcgggtgatgccgcatgtccatctg
tccttgcaggcgggcgacgatatggtgctcacccgcatgaagcgccgccaccgccgcgcc
gacgccgtgcgcctgaccgaacggctgaaggccgcgcgcgccgagatcgcggtcggcgcc
gacctgatcgcgggttttccgaccgaggacgaagcgatgttcgcaaactcgctggcgctg
atcgacgattgcgacatcgttttcggccatatctttccgtacagcccgcgcgccggcacc
cccgccgcgcggatgccgcaggtcgggcgcacaatggctcgcgaacgcgccgccgtgctg
cgagaagcaaatgcgcggcgccggcaggactggctcgatacgcagatcggccgcaccgca
tcgatgctcgtcgagcgcgacggcgtcagcggccacgccgagaatttcgccgccatggcg
ctgaccgcacccgcagcccccggcaccgtcatcagcgtgcgcctgaccgcgcgcgacggc
gaccgcatgatcgccacccccacgcaagcaaaggataacgcggcatga
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