Sphingopyxis fribergensis: SKP52_19135
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Entry
SKP52_19135 CDS
T03542
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00730
Thiamine metabolism
sphk01100
Metabolic pathways
sphk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SKP52_19135 (thiC)
Enzymes [BR:
sphk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SKP52_19135 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJA10696
UniProt:
A0A0A7PKV4
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All DBs
Position
complement(4046435..4048345)
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AA seq
636 aa
AA seq
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MADIDSKFESATPIGVTTGPIRGSRKIHVATQTGSGIRVAMREIDLDPHSGEPPVRVYDT
SGPYTDANATIDINAGLPEIRADWIRNRGDVQEVTQREVKPEDNGQLGPDRSGGVPAFPN
VRRQVLRAKPGANVSQMHYARRGIITPEMEYVAERENLGRARLSEYKRDGESFGASIPDY
VTPEFVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVAAEVDKMV
WSIRWGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGVAEDLTWEIFAD
TLIEQAEQGVDYFTIHAGVRLPYVPLAAKRMTGIVSRGGSIMAKWCLAHHKESFLYERFD
EITEIMKAYDVAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKRAWAQDVQVMIEGPGH
VPMHKIKENMEKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVT
PKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSL
DPDTAEQYHDQTLPAEGAKTAHFCSMCGPKFCSMKISQEVREFAAKQNQPAENFIAAEEA
EKLVPSEVEAGMAEMSELFKETGSELYMGAGGREHD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgactcgaagttcgaatccgcaaccccaatcggcgtcaccaccggcccg
atccgcggcagccgcaagatccatgtcgcgacgcagaccggcagcggcatccgcgtcgcg
atgcgcgagatcgacctcgacccgcattcgggcgagcctcccgtccgcgtctatgacacc
agcggcccctacaccgacgccaatgcgacgatcgacatcaacgccggcctccccgagatc
cgcgccgactggatccgcaatcgcggcgacgttcaggaggtcacccagcgcgaagtaaag
cccgaggataacggccagctcggcccggaccgcagcggcggcgtccccgccttccccaac
gtccgccgccaggtcctccgcgccaaacccggcgcgaacgtcagccagatgcactacgcc
cgccgcggcatcatcacgcccgagatggaatatgtcgccgagcgcgaaaatctcggccgc
gcccgcctgtccgagtacaagcgcgacggcgaaagcttcggcgccagcatccccgattat
gtcacccccgaattcgtccgcgacgaggtcgcccgcggccgcgcgatcatccccagcaac
atcaaccaccctgaaagcgagccgatggcgatcggccgcaacttcctcgtcaagatcaac
gccaatatcggcaacagcgcggtcgccagcgacgtcgcggccgaggtcgacaagatggtc
tggtcgatccgctggggcgccgacaccgtcatggacctgtcgaccggccgcaacatccac
gacacgcgcgaatggatcatccgcaattcgcccgtcccgatcggcaccgtccccatctat
caggcgctcgaaaaggtcggcggcgtcgccgaggatctgacctgggaaatcttcgccgac
acgctgatcgagcaagccgaacagggcgtcgactatttcaccatccacgccggggtccgc
ctgccctacgtccccctcgcggccaagcgcatgaccggcatcgtgtcgcgcggcggcagc
atcatggcgaaatggtgcctcgcgcatcacaaggaaagcttcctctacgaacgcttcgac
gagattaccgagatcatgaaggcctatgacgtcgcctacagccttggcgatggcctccgc
cccggcagcatctacgacgcgaacgacgaggcgcagttcgccgagctctacacgctgggc
gagctcaccaagcgcgcctgggcgcaggatgtgcaggtgatgatcgagggtccgggccac
gtcccgatgcacaagatcaaggagaatatggaaaagcagctcgaggcgtgcggcgaagcg
cccttctacaccctcgggccgctcaccaccgacatcgcgcccggctacgaccatatcacc
agcggcatcggcgctgcgcagatcggctggtacggcaccgcgatgctttgctacgtcacg
cccaaggagcatctgggcctgcccgaccgcgacgatgtgaaggtcggcgtcgtcacctac
aagctcgccgcccacgccgccgacctcgccaagggccaccccgccgcgcaggtccgcgac
gacgcgctatcgaaagcccgcttcgaattccgctggcgcgaccagttcaacctgtcgctc
gaccccgacacggcggagcaatatcacgaccagaccttgccggccgaaggcgccaagacc
gcccatttctgcagcatgtgcggccccaaattctgctcgatgaagatcagtcaggaagtg
cgcgagttcgcggcgaagcagaaccagcccgccgaaaacttcatcgccgccgaggaagcc
gaaaagcttgtgccgagcgaagtcgaggcaggcatggccgagatgagcgagctgtttaag
gaaacggggagcgagctttatatgggggctggtggcagggagcatgattga
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