KEGG   Sphingopyxis fribergensis: SKP52_19750
Entry
SKP52_19750       CDS       T03542                                 
Name
(GenBank) RNA polymerase subunit sigma 28
  KO
K02405  RNA polymerase sigma factor FliA
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk02020  Two-component system
sphk02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SKP52_19750
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SKP52_19750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sphk03021]
    SKP52_19750
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:sphk02035]
    SKP52_19750
Transcription machinery [BR:sphk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SKP52_19750
Bacterial motility proteins [BR:sphk02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    SKP52_19750
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-ProteinID: AJA10818
UniProt: A0A0A7PNM5
LinkDB
Position
4170706..4171452
AA seq 248 aa
MRIEPAEQFAGTASRAPRARGYGESVEALVEEYSPLVRKIAWQVFSRVSRTSELDDLIQT
GLIALIEASRNYEERGFAFATYATTRIRGAMIDQLRREADVGRSAMVAAKRIHAMRSTLE
QQLMRAPTTAEMAVAFDMSAEDYFALERNATHGRSTSLDELTDIGAFLAADEDAGADERF
EQEDLMGALRQCVGRLSHREQMVLQLYFFEELNLHEIGLTLDVSAARICQIKREAMIKVD
RMMKDMTE
NT seq 747 nt   +upstreamnt  +downstreamnt
atgagaattgagcccgccgaacaatttgccgggaccgccagccgcgcgccgcgcgcgcgc
ggctacggcgaaagtgtcgaagcgctggtcgaggaatattcgccgctggtccgcaagatc
gcgtggcaggtattttcgcgcgtgtcgcggacgagcgagctcgacgacctgatccagacc
gggctcatcgcgctgatcgaggcgagccgcaattatgaagagcgcggcttcgcctttgcc
acctatgcgacgacgcgcatccgcggcgcgatgatcgaccagctgcgccgcgaagcagac
gtcggccgttcggcgatggttgcggcgaagcggattcacgcgatgcgcagcacgctcgaa
cagcagttgatgcgcgcgccgacgacggccgaaatggcggtcgcgttcgatatgtcggcg
gaggactatttcgcgctcgagcgcaatgcgacgcacggccggtcgacctcgctcgacgaa
ctcaccgacatcggcgcgttccttgccgccgacgaagacgctggcgccgacgaacggttc
gaacaggaggatctgatgggcgcgctgcgccagtgcgtcggccgcctgtcgcatcgcgaa
cagatggtgttgcagctctatttcttcgaagaactcaacctgcacgagatcgggttgacc
ctcgacgttagcgccgcgcgcatttgccagatcaagcgcgaagcgatgatcaaggtcgat
cgcatgatgaaggacatgaccgaatag

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