Sphingopyxis fribergensis: SKP52_20115
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Entry
SKP52_20115 CDS
T03542
Name
(GenBank) conjugal transfer coupling protein TraG
Organism
sphk
Sphingopyxis fribergensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
PAXIP1_C
Motif
Other DBs
NCBI-ProteinID:
AJA10889
UniProt:
A0A0A7PLM0
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Position
4239464..4241461
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AA seq
665 aa
AA seq
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MSATKILWGQILAVFAIVLTSVWSATQWTAAALAHQPQLGSPWFTIGDWQIYPPPAFFWW
WFSFDAYAPDIFLHGAYIAVSGGFVSIAVAIGMSVWRARELKNAETYGSARWATETEARA
AGLLGDDGVILGKLGTNYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSCIVHDIKG
ENWGLTAGFRSRFGKVLLFDPTNAASAAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAESDKTLAGVANFLSDPGRPIETTLRAMMLTPHLGDAG
VHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPVVAAVTRQCDWRIADLVNGPHPV
SLYLVVPPSDINRTKPLVRLILNQIGRRLTEELNSTAKRQRLLLMLDEFPALGRLDFFES
ALAFMAGYGMKSFLIAQSLNQIEKAYGVNHSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPDDEIVMVAGTPPVRAKK
ARYFTDPRLTRRLLPAPKPRRNQRPPRPDDWTGIEPPPQPDSPPPSQSGGAAATPENADS
DDANANIRREPGLPDHEEVVREAPAPVNEFDFDEPDTASDEATTQRRMHRIARIASLDPG
DGIEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctaccaagatattgtggggccagatcctcgcagtcttcgcgatcgttctcaca
tcagtctggagcgcgacccagtggacggccgccgcgctcgcccatcaaccccagctcgga
tcaccctggttcaccataggcgactggcagatctatccgccgcccgctttcttctggtgg
tggttttcgttcgacgcctatgcacccgacatatttctgcacggcgcctatatcgccgtc
tcaggtggattcgtatcgattgccgtcgccataggcatgtcggtctggcgcgcccgtgaa
ctgaagaatgcagaaacctatggctcggcgcgctgggcgaccgagacggaggcgcgcgcc
gccggcttgctgggtgatgatggcgtcattctcggcaagctcggcacgaactatcttcgc
cacgatggcccggagcatgtgctgtgcttcgcgccaacccgctcgggcaagggcgtcggc
ctcgttgttcccagtttgctgacctggccgggcagctgcatcgtccacgacatcaagggc
gagaactggggactgaccgcaggcttccgcagccgtttcggcaaggtgctgctgttcgac
ccgaccaatgccgcgagcgcggcctataaccccttgctcgaagtgcgccgcggcgaatgg
gaagtccgcgatgttcagaatatcgccgacatattggtcgatcccgaagggtcgctcgag
aagcgcaaccactgggaaaagaccagccacgcgctgttggtgggcgccattctccatgtg
ctctatgccgagtccgacaagacgctggccggcgtcgccaacttcctcagcgatccgggc
cgcccgatcgagaccacgctgcgggccatgatgctaaccccgcatctgggagacgcgggc
gtccacccggtcgtcgcctcggcggcgcgggaactcctcaacaagagcgagaatgaacgg
tcgggggtgctctcgaccgccatgtcgttcctgggcttgtatcgcgatcccgtcgtcgcg
gccgtcacacggcaatgcgactggcgcatcgccgacctcgtgaacgggccgcatccagtc
tcgctctacctcgtcgtgccgccgtccgacatcaaccgcaccaagccgctggtccgcctc
atcctcaaccagatcggccgccggctgaccgaggagttgaactccactgccaagcggcag
cgcctgctgctgatgctcgacgagtttccggctttgggcaggctggacttcttcgaatcc
gcgctcgccttcatggccgggtacggaatgaaatccttcctgatcgcccagtcgctcaat
cagatcgagaaggcctatggcgtcaatcactcgatcctggataactgccacgtccgggtt
tcgttcgcgaccaacgacgagcggacggccaaacgggtctccgacgccctcggcaccgcg
accgaaatgcgggcgatgaaaaactatgcgggccacaggctcagcccctggctcggtcat
ctgatggtgtcgcgatccgagaccgcccgccagcttctcacgcctggagagatcatgcag
cttccacccgacgatgagatcgtcatggtggcgggcacgccgccggtgcgggcgaagaag
gcgcgatattttaccgatccccgtctcacccgccgcttgctgccggcgccaaaaccccgg
cgcaaccagcggccgccacgtccagacgactggacgggtatcgaaccgccgccgcagccg
gacagtccgcctccaagtcaatccggcggtgcggccgccacgcctgagaatgccgacagc
gatgacgccaatgccaatatccgccgtgagccggggcttcccgaccatgaggaggtggtg
cgtgaggcgccggcgcccgtcaacgagttcgatttcgacgaaccggatacagccagcgac
gaggcgaccacccagcgccggatgcaccgcatcgcccgcatcgcgagcctcgatcccggc
gacggcatcgagctttga
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