Sphingopyxis fribergensis: SKP52_20815
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Entry
SKP52_20815 CDS
T03542
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03030
DNA replication
sphk03430
Mismatch repair
sphk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SKP52_20815
03430 Mismatch repair
SKP52_20815
03440 Homologous recombination
SKP52_20815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphk03032
]
SKP52_20815
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_20815
Enzymes [BR:
sphk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SKP52_20815
DNA replication proteins [BR:
sphk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SKP52_20815
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SKP52_20815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DUF3131
Motif
Other DBs
NCBI-ProteinID:
AJA11027
UniProt:
A0A0A7PSL8
LinkDB
All DBs
Position
4390036..4390746
Genome browser
AA seq
236 aa
AA seq
DB search
MASMREIIFDTETTGFDPKSGDRLVEIGCVELIDRRETGVTFHAYFNPERDMPAAAEAVH
GLSIQFLSDKPLFATRVDELMEFLGDAPLVAHNAAFDFGFVNAELARAGRRALDMTRMCC
TVQMARKLHPGAKHSLDALCTRYGIDRSHRVKHGALLDAELLAHLYIEMTGGRQIGLGLA
ASAARTGASASPAPATSRGADRPFREPRPHMASTAEIARHAEFVAGLNQPLWLDTV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatgcgagagattattttcgataccgaaaccacgggtttcgatcccaagagc
ggggacaggctggtcgaaatcgggtgcgtcgaactgatcgaccgccgcgaaaccggcgtc
acctttcacgcctatttcaaccccgaacgcgatatgcccgccgccgccgaagcggtgcat
ggcctgtcgatccagttcctgtcagacaaacccttgttcgcgactcgcgtcgacgaactg
atggaatttttgggcgacgcgccgctcgtcgcgcacaacgccgcgttcgacttcggtttc
gtcaatgccgaactcgcccgcgccggccgccgcgcgctcgacatgacgcgcatgtgttgc
accgtccagatggcgcgcaagctccatcccggcgcgaagcacagcctcgacgcgctctgc
acgcgctacggcatcgaccgcagtcaccgcgtcaaacatggcgctttgctcgacgccgaa
ctgctcgcgcatctctatatcgaaatgaccggcgggcggcagatcggcctcggactcgca
gcttctgccgcgcgcacaggcgcctcggcctccccggcgcccgcgacatcgcgcggcgct
gatcgtccctttcgcgaaccccgtccccatatggcatcgaccgccgaaatcgcgcgccat
gccgaatttgtcgcagggctgaatcagccgctgtggctcgatacggtgtga
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