Sphingopyxis fribergensis: SKP52_21675
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Entry
SKP52_21675 CDS
T03542
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphk03000
]
SKP52_21675
Transcription factors [BR:
sphk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SKP52_21675
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Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
A_deaminase
DUF6325
Motif
Other DBs
NCBI-ProteinID:
AJA11189
UniProt:
A0A0A7PMJ7
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All DBs
Position
4560586..4561149
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AA seq
187 aa
AA seq
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MSTNTRELILSAAKRTAQAHGYGGLNFRDLAKDVGIKSASIHYYFPSKADLGAAVARRYR
EDAAAALEIMSNETPDPIACLRRYPDTFRTALQTNNRMCLGSFMAAEYDDLPAAVAKEVQ
DFADVNVAWIARQLSAASLISVEKSEQRARAIFAAIAGAQLLARSRSNLSFYDLAIDSFR
EAGLLPT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaacaccagggagctgatcctgagcgccgccaagcggaccgcgcaggcgcat
ggctatggcggtctgaattttcgcgatctcgcgaaggacgtgggcatcaagtcggccagc
atccattattattttcccagcaaagccgatctcggtgcggcggtagcgaggcgttatcgg
gaggatgctgcagcggctctggaaatcatgtcgaacgagacgccggatccgatcgcgtgt
ctgcgccgctatccggatacattccgtacggcactccagactaacaaccgaatgtgcctc
ggtagtttcatggccgccgagtatgacgatctgccggctgctgtggcgaaggaagtccag
gattttgccgacgtcaatgtcgcatggatcgcccgccaattatccgctgcttccctcatt
tccgtcgagaaaagcgaacagagggcgcgggcgatctttgccgccatcgcgggcgcccaa
ctattagcgagaagccgatcaaatctcagtttttatgacttggcaatcgacagcttccgc
gaggcggggcttttgccaacttaa
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