Sphingopyxis fribergensis: SKP52_22890
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Entry
SKP52_22890 CDS
T03542
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_22890
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_22890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Phage_coat
Motif
Other DBs
NCBI-ProteinID:
AJA11423
UniProt:
A0A0A7PQ59
LinkDB
All DBs
Position
4815241..4817355
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AA seq
704 aa
AA seq
DB search
MNKLYCYSSTKRAMQRSSMAAIAVAVAFPAQAQEAQSDGLAEIIVTAEKREENLQSVPVS
VTAMTGEALTATGISNVEDLQFFVPGVSITNDSMAIINIRGIGTSAFGVATDPSTTVHYD
GVYISRPTTSYQDLFDVERIEVLRGPQGVLFGRNSAGGTLNIISKMPTEDLTGALGLTVG
NYEKRSLSGTISGPLGAGVRGRLTLLANQRDGIYRDVVSGRRYQNEDNLAGRLTLAIDAS
DRLEIVLRADASRDRETGARSVRPFYPQGFVDAGATIPANDKEAALDRLPRYDVDAWGVS
STMNWDGGPVTLRSITALRKSKVVQALDVDSTDLFLRDIEFYERSRSFTQEFQLLNNDAD
KLRWIVGAFYLNEKGNDEIRIIEPGRRLAIPENNTTNAFALFGQASYELIDRLRLTGGLR
YSYEKKDFGYRVLLNGNQVDAGQPKSSWTAWTPKIGIDYDLADDVMAYASATRGFKSGGF
QLGDGRPFLPEYVWSYEVGLKSTLLDRRLRANFSAFYYDYTNLQVVEYNNGVASTTNAGK
ATIKGVEAELMARPFDRLTLTSTIAYLDARYDVYFDDVGASLKGKRLPNAPKWNITLGGE
YKASLGGGMLTLRTDISWRDSIFFKPSNNPLFSGNATTLINGRVAWQPASEAWEIALYGR
NLTNERYVSYSTIGTDATGVSNPTLPLYIYGEPRQYGLQLRYFF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattatactgttattcgtcgacgaagcgcgcaatgcagcgaagctcgatggcg
gcgattgcggtggcggtcgcgtttcccgcgcaggctcaggaagcccagtcggacggcctc
gccgagatcatcgtaacggcggagaagcgcgaggaaaatctgcagtccgttcccgtctcg
gtgacagcgatgaccggcgaggcgcttacggcaacgggcatatcaaacgtcgaagacctc
caattttttgtgccgggcgtgtcgatcaccaacgattccatggcgatcatcaatattcgt
ggaattggcacctcggcgttcggcgttgcgaccgaccccagcacgacagtccattatgac
ggcgtctacatctcgcgcccgaccacaagctatcaggatttgttcgacgtcgaacgcatc
gaggtgctgcgcggaccgcaaggcgttctcttcggtcgcaactccgccggcggcacactc
aacatcatttccaaaatgcctacggaggatttgactggcgcgctgggactcaccgtcgga
aattacgagaagcgctcgctgagcggcacgatttctggaccgcttggagcgggcgtccga
ggccgcctcaccttgcttgccaaccagcgcgacggcatctaccgcgacgtcgtctcggga
cggcgataccaaaacgaagataatctcgctggacgactgacgcttgcgattgacgcgagc
gaccgtcttgagatcgtgttgcgggcggatgccagccgtgatcgcgagaccggcgcgcgg
tctgttcggcccttttatccgcaaggcttcgtcgatgcgggggcgacgatcccggccaat
gacaaagaggccgcactcgaccgcctgccgcgttacgatgtcgatgcctggggcgtgtcc
tcgaccatgaactgggacggcggcccggtcacgctccgctcgattacggcgctgcgcaag
agcaaggtcgtccaggcgctcgacgttgactcgactgacctcttcctccgcgatatcgaa
ttttacgaacgttcccgcagtttcacgcaagagttccaacttctcaacaacgatgcggac
aagctgcgctggatcgtcggagcattctatctgaatgaaaagggcaacgacgaaatacgg
atcatcgaaccgggtcgtcggctcgcgatcccggaaaacaatacgacgaatgcattcgcg
ctcttcggacaagcaagctacgaactcatcgaccgcctgcgattgaccggagggcttcga
tactcatacgaaaaaaaggatttcggatatcgtgtcctgctgaacggaaatcaggtcgat
gccggtcagcccaaatcatcctggaccgcctggactccgaaaattgggatcgattacgac
cttgccgatgacgtcatggcttatgcgtcggcaacccgcgggttcaaatcgggtggattc
cagctgggagacgggcggcctttcctcccggagtatgtctggagctacgaagtcggcttg
aagtcgacgctcctcgatcgccggcttcgagctaatttttcggccttctattatgattac
accaatcttcaggtggtcgagtataataatggcgttgccagtaccaccaacgccggcaag
gcgacgatcaagggcgttgaagcggaactgatggcacggccgttcgatcgcctgacgctt
acatccacgatcgcttatctcgatgcgcgctacgatgtctattttgacgacgtcggcgca
agcctcaagggcaagcggctgccgaacgcgccgaagtggaacatcactctcggcggagaa
tataaggcctccctgggcggcggaatgctgacattacggaccgatatctcctggcgcgac
agcatctttttcaagcccagcaacaatccgcttttttccggaaacgccacgacccttata
aatgggcgtgtcgcatggcagccggcgagcgaagcgtgggaaattgcgctttatggccga
aatctcaccaacgagcgctatgtgagctatagtacgatcgggacggacgcgacgggtgtc
tcgaaccctactcttccgctctacatctacggcgagccgcgccagtacggattgcagctg
cgctactttttctga
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integrated database retrieval system
