KEGG   Sphingopyxis fribergensis: SKP52_23195
Entry
SKP52_23195       CDS       T03542                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sphk  Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphk03032]
    SKP52_23195
   03036 Chromosome and associated proteins [BR:sphk03036]
    SKP52_23195
   03400 DNA repair and recombination proteins [BR:sphk03400]
    SKP52_23195
DNA replication proteins [BR:sphk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SKP52_23195
Chromosome and associated proteins [BR:sphk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SKP52_23195
DNA repair and recombination proteins [BR:sphk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SKP52_23195
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 HU-CCDC81_bac_2 Peptidase_C23
Other DBs
NCBI-ProteinID: AJA11481
UniProt: A0A0A7PN00
LinkDB
Position
4884849..4885124
AA seq 91 aa
MNHAELSDSVATALGLSKADAKKAVDAVFAAITDAAAKGDEVSVNGFGKFKVKESAAREG
RNPSTGETIQIAASKKLTFGAAKAVKDRLNG
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaaccacgccgaactgtcggacagcgtcgcaaccgcacttggtctgagcaaggccgat
gcgaagaaggctgtcgatgccgttttcgctgcgatcaccgacgccgccgccaagggcgac
gaagtctcggtgaacggcttcggcaagttcaaggtcaaggaatcggccgcgcgtgaaggc
cgcaatccctcgactggcgaaaccatccagattgcggcttcgaagaagctgaccttcggc
gccgcgaaggccgtcaaggatcgtctgaacggctga

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