Sphingopyxis fribergensis: SKP52_23450
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Entry
SKP52_23450 CDS
T03542
Symbol
cobD
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00860
Porphyrin metabolism
sphk01100
Metabolic pathways
sphk01240
Biosynthesis of cofactors
Module
sphk_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SKP52_23450 (cobD)
Enzymes [BR:
sphk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
SKP52_23450 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
AJA11532
UniProt:
A0A0A7PTW0
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All DBs
Position
complement(4931506..4932444)
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AA seq
312 aa
AA seq
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MAEPIALTALALDSAFGWPRAFYRRIGHPVGLFARLIEGCEARWNRSEYGFGARRALGIL
TLLILLIFVGGSGWALQHLLISSLGGWGWIVVAILAWPALAQRSLFDHVRAVRERIDAGD
LAGARSTVGKIVGRDTAALDEAGVARAAIESLAESFCDGIAAPLFWLLLLGLPGIWAYKA
INTADSLIGHREDRWRAFGWAAARTDDLANWIPARLSGLLLCLAGGGGWRVLRRDARKHA
SPNAGWPEAAMAGALGLRLAGPIAYDGVMHDKYWIGDGASNAGGGDIDRALAVYLRACLL
LWLIAGVIAWLR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccgatcgcgctcaccgcgctcgcgctcgattccgcatttggctggccgcgc
gcgttctatcgccgcatcggtcacccggtcgggctgtttgcgcgcttgatcgagggttgc
gaggcgcggtggaaccgttccgaatatggcttcggcgcgcggcgcgcgcttggtatcctg
acgctgctcatcctgctcatattcgttggaggctccggctgggcgctccagcacctccta
atatcgtcgcttggcggctggggctggatcgtcgtggccatccttgcctggcccgcgctc
gcgcagcgcagccttttcgatcatgtccgcgcggtccgcgaaaggatcgacgcgggcgac
ctcgccggcgcacgaagcacggtcggcaagatcgtcggccgcgacaccgccgcgctcgac
gaggccggcgtcgcgcgtgccgcgatcgaaagcctcgccgaaagtttttgcgacggcatt
gcggcgccgctcttctggctccttctgctcggtcttccgggcatttgggcgtacaaagca
attaacacagcggacagcctgatcggccaccgcgaggaccgctggcgcgccttcggctgg
gcggcggcgcgcacggacgacctcgcgaactggattcccgcgcggctgtcggggctgctg
ctgtgcctcgcgggcggcggcgggtggcgtgtcctgaggcgcgatgcgcgcaagcacgcc
tcgcccaatgccggctggcccgaggccgcgatggcgggcgcactggggcttcggctggcg
ggcccgatcgcatatgacggcgtgatgcacgataaatactggatcggcgacggggccagc
aacgcgggcggcggtgacatcgaccgcgcgcttgccgtctatctgcgcgcgtgcctgctg
ctgtggctgattgcaggggtcatcgcatggctgcgctga
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