Sphingopyxis fribergensis: SKP52_23485
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Entry
SKP52_23485 CDS
T03542
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_23485
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_23485
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AJA11539
UniProt:
A0A0A7PNF6
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All DBs
Position
complement(4936667..4938625)
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AA seq
652 aa
AA seq
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MFRIFFRSSICLAAVAASSAASADEASTAHAVAADGDSIVVTATRAPLTLDEIPSSVAVL
DKAAIDRAQDIGVTELLLRTPGISISRNGGYGTSTSLRIRGAESEHSVVVIDGVKLNDPS
STGGGFNFTNLLAGDISRIEVLRGPQSILWGSQAIGGVVNVVTASPEKALEGSFDLEAGS
RQTVSARAAVGGRTGPLHWRIGGQRFTTDGISSHAKAFGGTERDGYRNSNVSGRAELALA
DNVSAEVRGTYSSGRVEFDGFNTDSNDYGQNKEFVGYAGLNVDLVGGRFRNRIAYAYTDT
NRDNFNPDRARPRSFEADGKNKRWEYQGSFDVSDRITAIFGVENERSDFRSRSPSASLAT
PLPAFVRGKAEITSVYGQLSVEPISGLTLNGGVRYDDHDRYGGQTLFAAGGVWRLPTGTV
LRASYGEGFKAPGLYQLFSEYGNIGLDPEEAHGWEAGIEQHLFDRKLVVGATWFDRTTTN
QIIYNGCSAPSTDPMCFVPGSNPPNPRFGYYLNVARSEAHGVEAVAAMTLGGLRLDGNYS
WIVAEDRSPGANFGNWLPRRPRNIANASASYGFDFGLELGAALRWSGKSYDNASNAQRLD
DYTLVDLRAEFALSDTVKLFARAENIFDEHYMTAFRYGSLGRSIYAGIRGRF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaatatttttccgaagttctatctgcctcgccgccgtcgcggcatcctctgcc
gcgtccgccgacgaggcgtccaccgcgcacgccgttgccgccgacggcgacagcatcgtc
gtcaccgcgacgcgcgcaccgctgaccctcgacgagatcccgtcatcggtcgccgtgctc
gacaaggcggcaatcgaccgcgcgcaggatatcggcgtcaccgaattgctgctccgcacg
ccggggatcagcatctcgcgcaacggcggttatggcacgtcgacctcgctgcgcatccgc
ggcgccgaatcggagcatagcgtcgtcgtgatcgacggagtgaagctcaacgatccgtcg
tcgaccggcggcggcttcaacttcaccaatctgctcgcgggcgatatttcgcgcatcgag
gtgctgcgcgggccgcagtcgatcctttggggcagccaagcaatcggcggcgtcgtcaac
gtcgtgaccgcctcgcccgaaaaggcgctcgaaggcagtttcgacctcgaggccgggtca
cgccaaacggtcagtgcgcgcgccgcagtcggcggccgcactggtcccttgcactggcgc
atcggcggccagcgtttcaccaccgacggcatttcatcgcacgccaaggcgttcggcggg
actgagcgcgacggctatcgcaacagcaatgtttcgggccgcgccgaactcgcgctcgcc
gacaatgtcagcgccgaggtgcgcggcacttattcgagcggccgggtcgaattcgacggc
ttcaacaccgacagcaatgattatgggcagaataaggagttcgtcggttacgcggggctg
aatgtcgacctcgtcggcggacgcttccgcaaccgcatcgcttacgcctacaccgacacc
aatcgcgacaatttcaaccccgaccgcgcgcgtccgcgcagtttcgaggccgacggcaag
aacaagcgctgggaatatcagggcagcttcgacgtcagcgatcgcatcaccgcgatcttc
ggggtcgagaatgagcgttcggacttccgcagccgatcgccctcggcatcgctggcaacc
ccgctcccggctttcgtgcgcggcaaggccgagattaccagcgtttatggccagctcagc
gtcgagccgatcagcgggctgacgctgaatggcggtgtccgctacgacgatcatgaccgc
tacggcgggcagaccttgttcgccgcgggcggcgtgtggcggctgccgacgggaaccgtg
ctgcgcgcaagctatggcgaggggttcaaggcgccggggctttaccagctgttcagcgaa
tatgggaatatcgggctcgaccccgaggaagcgcatggctgggaagcgggtatcgagcag
catctgttcgatcgcaagctcgtcgtcggcgcaacctggttcgaccgtacgacgaccaac
cagatcatctacaatggctgctcggcgccctcgaccgacccgatgtgctttgttcccggc
agcaacccgcccaatccacgcttcggctattatctgaacgtcgcgcgcagcgaagcgcat
ggggtcgaggcggtcgccgcgatgaccctcggcggactgcggctggacggcaattatagc
tggatcgtcgccgaagaccgctcgccgggcgccaatttcggcaactggctgccgcgccgt
ccgcgcaatatcgcgaatgcctcggcaagctatggcttcgatttcgggctcgaactcggc
gccgcgcttcgctggtcgggcaagagctatgataatgcgagcaacgcccaacggctcgac
gattacacactcgtcgacctgcgcgccgaatttgcgctgtccgacacggtgaagctgttc
gcgcgcgccgagaatatctttgacgagcactatatgaccgcgttccgttacggttcgctc
ggccgcagcatctatgccggcatccgggggcgcttctga
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