Sphingopyxis fribergensis: SKP52_23495
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Entry
SKP52_23495 CDS
T03542
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphk03009
]
SKP52_23495 (rlmE)
Enzymes [BR:
sphk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
SKP52_23495 (rlmE)
Ribosome biogenesis [BR:
sphk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SKP52_23495 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AJA11541
UniProt:
A0A0A7PN65
LinkDB
All DBs
Position
complement(4940492..4941202)
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AA seq
236 aa
AA seq
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MSGAGGKGGSGRGGLHVRVKTARKRSVSSTRWLQRQLNDPYVRRAQAEGYRSRAAYKLIE
LDEKFGFIKKARAVVDLGITPGGWSQVVRKANPRARVAGIDLLHCEPLEGVEILEMDFMD
DAAPDALIEALGSAPDLVISDMAANTVGHQQTDHLRTIGLAETAADFAVQNLLPGGAFVA
KVFAGGADHTLLTLLKRHFSTVKHAKPPASRKGSPELYVIAQGFKGRSNDAGVDAE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgccggcggaaagggcggcagcggccgcggcggcctgcacgtacgcgtcaag
accgcgcgcaagcgcagcgtctcgtcgacacggtggctgcaacggcagctcaacgacccc
tatgtgcgccgcgcgcaggccgagggatatcgctcgcgcgccgcgtacaagctgatcgag
ctcgacgagaaattcggcttcatcaagaaagcgcgcgcggtcgtcgacctgggcatcacg
ccgggcggttggtcgcaggtcgtgcgcaaggcgaacccgcgcgcgcgcgtcgcggggatc
gacctgctccactgcgaaccgctcgagggtgtcgaaatcctcgagatggatttcatggac
gatgcggcgcccgatgccttgatcgaggcgctgggcagcgcccccgatctcgtcatttcg
gacatggcggcgaacaccgtcggccaccagcagaccgatcatctgcgcacgatcgggctg
gcggagacagccgccgatttcgcggtgcagaatttgctgcccggcggtgctttcgtggcc
aaggtgtttgcgggtggggccgatcacacgctgctgactttactaaaacgtcatttttca
acggtaaagcacgcaaaaccgcccgcgagccgtaaagggtcgcccgaactttatgtcatc
gcccaaggtttcaagggccggagcaatgacgcgggggtggacgcggaatag
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