KEGG   Sphingopyxis fribergensis: SKP52_23875
Entry
SKP52_23875       CDS       T03542                                 
Name
(GenBank) TraH family protein
  KO
K12072  conjugative transfer pilus assembly protein TraH
Organism
sphk  Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphk02044]
    SKP52_23875
Secretion system [BR:sphk02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   SKP52_23875
SSDB
Motif
Pfam: TraH DUF3847
Other DBs
NCBI-ProteinID: AJA11617
UniProt: A0A0A7PU51
LinkDB
Position
pSfKp5.2:33442..34890
AA seq 482 aa
MVDIKFIARIRVAVSRIGIGIIALSVAAAPAQAGVGDEMSDFFNDMGASANATGATAYQG
QSAGYYSLGSVWARFPQKSVYPANIQLPKVRAGCGGIDIFSGSFSFINMSEFVANLKAIA
NNAIGFAFKLAIDSISPQIGGVIDQMQDIANKVNQFNMQSCEAAAAAVGAVWPKVDAAED
RICQSIGTSAGRFSDWAKSRRGCGNGGERSSTINSNTDLALAAMTPGPKNYAWDMIKQSP
LESSDRQMRELVMTLTGTIVVGKRPSDNDPLPIIYRGEGDPAILDALLDGDKEIDVLGCD
ETDKCLNPGKRTIPALGATALRPRVAMLIQSMSDKVRSNAALTTEEKNLLGVASIPLYKV
VAVQAASGFNLSPGELNSLAEVTAIDLLNSIVQRMLDQVASGQSNNSNQADSENLRQFNE
QLARVRQRLFERESTVNQRVTRTFEIVDRAMMIESTLQTRMAPGMAASLNFSRALSAQGL
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggtcgacatcaaattcatcgcgcggatccgcgtggccgtttcccggatcgggattggc
atcattgcgctttccgtagccgcggcgccggcacaggcgggcgttggcgacgagatgagc
gacttcttcaacgatatgggcgcgtcggctaatgctaccggggcgacggcctatcagggc
cagtccgcgggctattactcgctcggctccgtatgggcccggttcccgcaaaagagcgtc
tatcccgccaacatccagcttccgaaagtccgtgctggctgcggcggcatcgacatcttc
tcgggctccttctccttcatcaacatgtcggaattcgtcgccaacctgaaggcgatcgcg
aataacgccatcggctttgccttcaagctcgcaatcgacagcatcagtccgcaaatcggc
ggcgtgatcgaccagatgcaggacatcgccaacaaagtgaaccagttcaacatgcagagc
tgcgaggcagccgccgcggccgtcggcgccgtatggccgaaggtcgacgcggcggaggat
cgaatttgccagtcgatcggcacgtctgcagggcgcttctccgactgggcaaagtcgcgt
cgcggatgcggtaatggcggcgagcgatcgtcgacgatcaattcgaataccgacctggcg
cttgcggcaatgaccccgggcccgaaaaactacgcctgggacatgatcaagcaatcgccg
cttgaaagctcggatcggcagatgcgcgagctcgtcatgacgcttacgggcacgatcgtc
gtgggcaagcgtccatcggacaacgacccgctcccgatcatctataggggggagggcgat
cccgcgatcctcgatgcgctgcttgacggcgacaaggagatcgacgtcctcggctgtgac
gaaaccgacaagtgcctcaatccgggcaagcggacgatcccggcgcttggggctacggca
ttgcggcctcgtgttgcaatgttgatccagtcgatgagcgacaaggtgcggagcaatgcg
gcactgacgaccgaagagaagaacctcctcggcgttgccagcatcccgctttacaaggtt
gttgccgtacaggcggcctcgggcttcaacctgtcgccgggcgagctcaactcgctcgcc
gaagtcaccgcgatcgacctgctcaactcgatcgtccagcggatgctcgatcaggtggcc
tcgggccagtcgaacaacagcaatcaagccgattccgaaaatttgcgccagttcaacgaa
cagcttgcgcgcgtgcgccagcggctgttcgagcgcgaaagcacggtgaaccagcgcgtg
acgcggacctttgagatcgtcgatcgcgcgatgatgatcgaaagcaccctgcagacgcgc
atggcgccggggatggcggcatccctgaatttctcccgcgctttgtcggcgcaaggtttg
cggccctga

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